Gene : AT4G02480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23074:SF70 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  289
Name:  ? AT4G02480 Secondary Identifier:  ? PAC:19646934
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02480 0.5kb upstream 0.5kb upstream 7588 true Chr4: 1081759-1089346 Arabidopsis thaliana
AT4G02480 0.5kb upstream 0.5kb upstream 500 false Chr4: 1088847-1089346 Arabidopsis thaliana
AT4G02480 0.5kb downstream 0.5kb downstream 7588 true Chr4: 1081259-1088846 Arabidopsis thaliana
AT4G02480 0.5kb downstream 0.5kb downstream 500 false Chr4: 1081259-1081758 Arabidopsis thaliana
AT4G02480 1.0kb upstream 1.0kb upstream 8088 true Chr4: 1081759-1089846 Arabidopsis thaliana
AT4G02480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1088847-1089846 Arabidopsis thaliana
AT4G02480 1.0kb downstream 1.0kb downstream 8088 true Chr4: 1080759-1088846 Arabidopsis thaliana
AT4G02480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1080759-1081758 Arabidopsis thaliana
AT4G02480 2.0kb upstream 2.0kb upstream 9088 true Chr4: 1081759-1090846 Arabidopsis thaliana
AT4G02480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1088847-1090846 Arabidopsis thaliana
AT4G02480 2.0kb downstream 2.0kb downstream 9088 true Chr4: 1079759-1088846 Arabidopsis thaliana
AT4G02480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1079759-1081758 Arabidopsis thaliana
AT4G02480 5.0kb upstream 5.0kb upstream 12088 true Chr4: 1081759-1093846 Arabidopsis thaliana
AT4G02480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1088847-1093846 Arabidopsis thaliana
AT4G02480 5.0kb downstream 5.0kb downstream 12088 true Chr4: 1076759-1088846 Arabidopsis thaliana
AT4G02480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1076759-1081758 Arabidopsis thaliana
AT4G02480 10.0kb upstream 10.0kb upstream 17088 true Chr4: 1081759-1098846 Arabidopsis thaliana
AT4G02480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1088847-1098846 Arabidopsis thaliana
AT4G02480 10.0kb downstream 10.0kb downstream 17088 true Chr4: 1071759-1088846 Arabidopsis thaliana
AT4G02480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1071759-1081758 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374228 5261 Brassicaceae View MSA
123837664 5264 Brassicales-Malvales View MSA
124345998 5266 SBM View MSA
124249944 5268 Malvidae View MSA
124068666 5270 Rosid View MSA
123753668 5271 Pentapetalae View MSA
122786606 5272 Eudicot View MSA
122042163 5273 Angiosperm View MSA
121351311 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.386     High  
cufflinks 46.561     High  
cufflinks 38.25     High Low
cufflinks 49.09     High High
cufflinks 42.235     High  
cufflinks 44.71     High  

0 Strain