Gene : AT4G02320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31707:SF25 - PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED Genomic Order:  270
Name:  ? AT4G02320 Secondary Identifier:  ? PAC:19646748
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02320 0.5kb upstream 0.5kb upstream 3894 true Chr4: 1022725-1026618 Arabidopsis thaliana
AT4G02320 0.5kb upstream 0.5kb upstream 500 false Chr4: 1026119-1026618 Arabidopsis thaliana
AT4G02320 0.5kb downstream 0.5kb downstream 3894 true Chr4: 1022225-1026118 Arabidopsis thaliana
AT4G02320 0.5kb downstream 0.5kb downstream 500 false Chr4: 1022225-1022724 Arabidopsis thaliana
AT4G02320 1.0kb upstream 1.0kb upstream 4394 true Chr4: 1022725-1027118 Arabidopsis thaliana
AT4G02320 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1026119-1027118 Arabidopsis thaliana
AT4G02320 1.0kb downstream 1.0kb downstream 4394 true Chr4: 1021725-1026118 Arabidopsis thaliana
AT4G02320 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1021725-1022724 Arabidopsis thaliana
AT4G02320 2.0kb upstream 2.0kb upstream 5394 true Chr4: 1022725-1028118 Arabidopsis thaliana
AT4G02320 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1026119-1028118 Arabidopsis thaliana
AT4G02320 2.0kb downstream 2.0kb downstream 5394 true Chr4: 1020725-1026118 Arabidopsis thaliana
AT4G02320 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1020725-1022724 Arabidopsis thaliana
AT4G02320 5.0kb upstream 5.0kb upstream 8394 true Chr4: 1022725-1031118 Arabidopsis thaliana
AT4G02320 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1026119-1031118 Arabidopsis thaliana
AT4G02320 5.0kb downstream 5.0kb downstream 8394 true Chr4: 1017725-1026118 Arabidopsis thaliana
AT4G02320 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1017725-1022724 Arabidopsis thaliana
AT4G02320 10.0kb upstream 10.0kb upstream 13394 true Chr4: 1022725-1036118 Arabidopsis thaliana
AT4G02320 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1026119-1036118 Arabidopsis thaliana
AT4G02320 10.0kb downstream 10.0kb downstream 13394 true Chr4: 1012725-1026118 Arabidopsis thaliana
AT4G02320 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1012725-1022724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378121 5261 Brassicaceae View MSA
123838203 5264 Brassicales-Malvales View MSA
124343008 5266 SBM View MSA
124253387 5268 Malvidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low Low
cufflinks 0.09     Low  
cufflinks 0.071     Low  
cufflinks 0.096     Low  
cufflinks 0.027     Low Low
cufflinks 0.217     Low High

0 Strain