Gene : AT4G02300 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31707:SF25 - PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED Genomic Order:  268
Name:  ? AT4G02300 Secondary Identifier:  ? PAC:19644345
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02300 0.5kb upstream 0.5kb upstream 4169 true Chr4: 1009366-1013534 Arabidopsis thaliana
AT4G02300 0.5kb upstream 0.5kb upstream 500 false Chr4: 1013035-1013534 Arabidopsis thaliana
AT4G02300 0.5kb downstream 0.5kb downstream 4169 true Chr4: 1008866-1013034 Arabidopsis thaliana
AT4G02300 0.5kb downstream 0.5kb downstream 500 false Chr4: 1008866-1009365 Arabidopsis thaliana
AT4G02300 1.0kb upstream 1.0kb upstream 4669 true Chr4: 1009366-1014034 Arabidopsis thaliana
AT4G02300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1013035-1014034 Arabidopsis thaliana
AT4G02300 1.0kb downstream 1.0kb downstream 4669 true Chr4: 1008366-1013034 Arabidopsis thaliana
AT4G02300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1008366-1009365 Arabidopsis thaliana
AT4G02300 2.0kb upstream 2.0kb upstream 5669 true Chr4: 1009366-1015034 Arabidopsis thaliana
AT4G02300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1013035-1015034 Arabidopsis thaliana
AT4G02300 2.0kb downstream 2.0kb downstream 5669 true Chr4: 1007366-1013034 Arabidopsis thaliana
AT4G02300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1007366-1009365 Arabidopsis thaliana
AT4G02300 5.0kb upstream 5.0kb upstream 8669 true Chr4: 1009366-1018034 Arabidopsis thaliana
AT4G02300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1013035-1018034 Arabidopsis thaliana
AT4G02300 5.0kb downstream 5.0kb downstream 8669 true Chr4: 1004366-1013034 Arabidopsis thaliana
AT4G02300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1004366-1009365 Arabidopsis thaliana
AT4G02300 10.0kb upstream 10.0kb upstream 13669 true Chr4: 1009366-1023034 Arabidopsis thaliana
AT4G02300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1013035-1023034 Arabidopsis thaliana
AT4G02300 10.0kb downstream 10.0kb downstream 13669 true Chr4: 999366-1013034 Arabidopsis thaliana
AT4G02300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 999366-1009365 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371343 5261 Brassicaceae View MSA
123838203 5264 Brassicales-Malvales View MSA
124343008 5266 SBM View MSA
124253387 5268 Malvidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  

0 Strain