Gene : AT4G02160 A. thaliana TAIR10
Defline:  (1 of 28) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  253
Name:  ? AT4G02160 Secondary Identifier:  ? PAC:19646028
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02160 0.5kb upstream 0.5kb upstream 1052 true Chr4: 955101-956152 Arabidopsis thaliana
AT4G02160 0.5kb upstream 0.5kb upstream 500 false Chr4: 955653-956152 Arabidopsis thaliana
AT4G02160 0.5kb downstream 0.5kb downstream 1052 true Chr4: 954601-955652 Arabidopsis thaliana
AT4G02160 0.5kb downstream 0.5kb downstream 500 false Chr4: 954601-955100 Arabidopsis thaliana
AT4G02160 1.0kb upstream 1.0kb upstream 1552 true Chr4: 955101-956652 Arabidopsis thaliana
AT4G02160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 955653-956652 Arabidopsis thaliana
AT4G02160 1.0kb downstream 1.0kb downstream 1552 true Chr4: 954101-955652 Arabidopsis thaliana
AT4G02160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 954101-955100 Arabidopsis thaliana
AT4G02160 2.0kb upstream 2.0kb upstream 2552 true Chr4: 955101-957652 Arabidopsis thaliana
AT4G02160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 955653-957652 Arabidopsis thaliana
AT4G02160 2.0kb downstream 2.0kb downstream 2552 true Chr4: 953101-955652 Arabidopsis thaliana
AT4G02160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 953101-955100 Arabidopsis thaliana
AT4G02160 5.0kb upstream 5.0kb upstream 5552 true Chr4: 955101-960652 Arabidopsis thaliana
AT4G02160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 955653-960652 Arabidopsis thaliana
AT4G02160 5.0kb downstream 5.0kb downstream 5552 true Chr4: 950101-955652 Arabidopsis thaliana
AT4G02160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 950101-955100 Arabidopsis thaliana
AT4G02160 10.0kb upstream 10.0kb upstream 10552 true Chr4: 955101-965652 Arabidopsis thaliana
AT4G02160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 955653-965652 Arabidopsis thaliana
AT4G02160 10.0kb downstream 10.0kb downstream 10552 true Chr4: 945101-955652 Arabidopsis thaliana
AT4G02160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 945101-955100 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373409 5261 Brassicaceae View MSA
123839866 5264 Brassicales-Malvales View MSA
124347928 5266 SBM View MSA
124237815 5268 Malvidae View MSA
124069714 5270 Rosid View MSA
123741153 5271 Pentapetalae View MSA
122791479 5272 Eudicot View MSA
122048852 5273 Angiosperm View MSA
121311139 5274 Embryophyte View MSA
123348476 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.164     Low  
cufflinks 0.03     Low  
cufflinks 0.112     Low  
cufflinks 0.029     Low  
cufflinks 0.55       High

0 Strain