Gene : MSH6 A. thaliana TAIR10
Primary Identifier:  ? AT4G02070 Defline:  (1 of 1) PTHR11361//PTHR11361:SF89 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // DNA MISMATCH REPAIR PROTEIN MSH6
Genomic Order:  243 Name:  ? AT4G02070
Secondary Identifier:  ? PAC:19649065
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02070 0.5kb upstream 0.5kb upstream 7825 true Chr4: 905366-913190 Arabidopsis thaliana
AT4G02070 0.5kb upstream 0.5kb upstream 500 false Chr4: 905366-905865 Arabidopsis thaliana
AT4G02070 0.5kb downstream 0.5kb downstream 7825 true Chr4: 905866-913690 Arabidopsis thaliana
AT4G02070 0.5kb downstream 0.5kb downstream 500 false Chr4: 913191-913690 Arabidopsis thaliana
AT4G02070 1.0kb upstream 1.0kb upstream 8325 true Chr4: 904866-913190 Arabidopsis thaliana
AT4G02070 1.0kb upstream 1.0kb upstream 1000 false Chr4: 904866-905865 Arabidopsis thaliana
AT4G02070 1.0kb downstream 1.0kb downstream 8325 true Chr4: 905866-914190 Arabidopsis thaliana
AT4G02070 1.0kb downstream 1.0kb downstream 1000 false Chr4: 913191-914190 Arabidopsis thaliana
AT4G02070 2.0kb upstream 2.0kb upstream 9325 true Chr4: 903866-913190 Arabidopsis thaliana
AT4G02070 2.0kb upstream 2.0kb upstream 2000 false Chr4: 903866-905865 Arabidopsis thaliana
AT4G02070 2.0kb downstream 2.0kb downstream 9325 true Chr4: 905866-915190 Arabidopsis thaliana
AT4G02070 2.0kb downstream 2.0kb downstream 2000 false Chr4: 913191-915190 Arabidopsis thaliana
AT4G02070 5.0kb upstream 5.0kb upstream 12325 true Chr4: 900866-913190 Arabidopsis thaliana
AT4G02070 5.0kb upstream 5.0kb upstream 5000 false Chr4: 900866-905865 Arabidopsis thaliana
AT4G02070 5.0kb downstream 5.0kb downstream 12325 true Chr4: 905866-918190 Arabidopsis thaliana
AT4G02070 5.0kb downstream 5.0kb downstream 5000 false Chr4: 913191-918190 Arabidopsis thaliana
AT4G02070 10.0kb upstream 10.0kb upstream 17325 true Chr4: 895866-913190 Arabidopsis thaliana
AT4G02070 10.0kb upstream 10.0kb upstream 10000 false Chr4: 895866-905865 Arabidopsis thaliana
AT4G02070 10.0kb downstream 10.0kb downstream 17325 true Chr4: 905866-923190 Arabidopsis thaliana
AT4G02070 10.0kb downstream 10.0kb downstream 10000 false Chr4: 913191-923190 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371889 5261 Brassicaceae View MSA
123831702 5264 Brassicales-Malvales View MSA
124346183 5266 SBM View MSA
124252379 5268 Malvidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.008        
cufflinks 1.678        
cufflinks 0.787       Low
cufflinks 1.765        
cufflinks 0.732       Low
cufflinks 1.688        

0 Strain