Gene : KNAT1 A. thaliana TAIR10
Primary Identifier:  ? AT4G08150 Defline:  (1 of 1) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1
Genomic Order:  628 Name:  ? AT4G08150
Secondary Identifier:  ? PAC:19648854
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08150 0.5kb upstream 0.5kb upstream 3767 true Chr4: 5147700-5151466 Arabidopsis thaliana
AT4G08150 0.5kb upstream 0.5kb upstream 500 false Chr4: 5150967-5151466 Arabidopsis thaliana
AT4G08150 0.5kb downstream 0.5kb downstream 3767 true Chr4: 5147200-5150966 Arabidopsis thaliana
AT4G08150 0.5kb downstream 0.5kb downstream 500 false Chr4: 5147200-5147699 Arabidopsis thaliana
AT4G08150 1.0kb upstream 1.0kb upstream 4267 true Chr4: 5147700-5151966 Arabidopsis thaliana
AT4G08150 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5150967-5151966 Arabidopsis thaliana
AT4G08150 1.0kb downstream 1.0kb downstream 4267 true Chr4: 5146700-5150966 Arabidopsis thaliana
AT4G08150 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5146700-5147699 Arabidopsis thaliana
AT4G08150 2.0kb upstream 2.0kb upstream 5267 true Chr4: 5147700-5152966 Arabidopsis thaliana
AT4G08150 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5150967-5152966 Arabidopsis thaliana
AT4G08150 2.0kb downstream 2.0kb downstream 5267 true Chr4: 5145700-5150966 Arabidopsis thaliana
AT4G08150 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5145700-5147699 Arabidopsis thaliana
AT4G08150 5.0kb upstream 5.0kb upstream 8267 true Chr4: 5147700-5155966 Arabidopsis thaliana
AT4G08150 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5150967-5155966 Arabidopsis thaliana
AT4G08150 5.0kb downstream 5.0kb downstream 8267 true Chr4: 5142700-5150966 Arabidopsis thaliana
AT4G08150 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5142700-5147699 Arabidopsis thaliana
AT4G08150 10.0kb upstream 10.0kb upstream 13267 true Chr4: 5147700-5160966 Arabidopsis thaliana
AT4G08150 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5150967-5160966 Arabidopsis thaliana
AT4G08150 10.0kb downstream 10.0kb downstream 13267 true Chr4: 5137700-5150966 Arabidopsis thaliana
AT4G08150 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5137700-5147699 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364678 5261 Brassicaceae View MSA
123841434 5264 Brassicales-Malvales View MSA
124345663 5266 SBM View MSA
124248525 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.519        
cufflinks 71.011     High High
cufflinks 0.254     Low Low
cufflinks 39.652     High  
cufflinks 0.492        
cufflinks 51.267     High  

0 Strain