Gene : AT4G06676 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21389 - P53 INDUCED PROTEIN Genomic Order:  593
Name:  ? AT4G06676 Secondary Identifier:  ? PAC:19644249
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G06676 0.5kb upstream 0.5kb upstream 3626 true Chr4: 3898365-3901990 Arabidopsis thaliana
AT4G06676 0.5kb upstream 0.5kb upstream 500 false Chr4: 3898365-3898864 Arabidopsis thaliana
AT4G06676 0.5kb downstream 0.5kb downstream 3626 true Chr4: 3898865-3902490 Arabidopsis thaliana
AT4G06676 0.5kb downstream 0.5kb downstream 500 false Chr4: 3901991-3902490 Arabidopsis thaliana
AT4G06676 1.0kb upstream 1.0kb upstream 4126 true Chr4: 3897865-3901990 Arabidopsis thaliana
AT4G06676 1.0kb upstream 1.0kb upstream 1000 false Chr4: 3897865-3898864 Arabidopsis thaliana
AT4G06676 1.0kb downstream 1.0kb downstream 4126 true Chr4: 3898865-3902990 Arabidopsis thaliana
AT4G06676 1.0kb downstream 1.0kb downstream 1000 false Chr4: 3901991-3902990 Arabidopsis thaliana
AT4G06676 2.0kb upstream 2.0kb upstream 5126 true Chr4: 3896865-3901990 Arabidopsis thaliana
AT4G06676 2.0kb upstream 2.0kb upstream 2000 false Chr4: 3896865-3898864 Arabidopsis thaliana
AT4G06676 2.0kb downstream 2.0kb downstream 5126 true Chr4: 3898865-3903990 Arabidopsis thaliana
AT4G06676 2.0kb downstream 2.0kb downstream 2000 false Chr4: 3901991-3903990 Arabidopsis thaliana
AT4G06676 5.0kb upstream 5.0kb upstream 8126 true Chr4: 3893865-3901990 Arabidopsis thaliana
AT4G06676 5.0kb upstream 5.0kb upstream 5000 false Chr4: 3893865-3898864 Arabidopsis thaliana
AT4G06676 5.0kb downstream 5.0kb downstream 8126 true Chr4: 3898865-3906990 Arabidopsis thaliana
AT4G06676 5.0kb downstream 5.0kb downstream 5000 false Chr4: 3901991-3906990 Arabidopsis thaliana
AT4G06676 10.0kb upstream 10.0kb upstream 13126 true Chr4: 3888865-3901990 Arabidopsis thaliana
AT4G06676 10.0kb upstream 10.0kb upstream 10000 false Chr4: 3888865-3898864 Arabidopsis thaliana
AT4G06676 10.0kb downstream 10.0kb downstream 13126 true Chr4: 3898865-3911990 Arabidopsis thaliana
AT4G06676 10.0kb downstream 10.0kb downstream 10000 false Chr4: 3901991-3911990 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370368 5261 Brassicaceae View MSA
123829704 5264 Brassicales-Malvales View MSA
124337393 5266 SBM View MSA
124238213 5268 Malvidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.518        
cufflinks 2.744        
cufflinks 1.334       Low
cufflinks 3.292       High
cufflinks 1.407        
cufflinks 2.64        

0 Strain