Gene : AT4G05160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24096:SF236 - PROTEIN ACS-9 Genomic Order:  538
Name:  ? AT4G05160 Secondary Identifier:  ? PAC:19644130
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05160 0.5kb upstream 0.5kb upstream 2823 true Chr4: 2663885-2666707 Arabidopsis thaliana
AT4G05160 0.5kb upstream 0.5kb upstream 500 false Chr4: 2663885-2664384 Arabidopsis thaliana
AT4G05160 0.5kb downstream 0.5kb downstream 2823 true Chr4: 2664385-2667207 Arabidopsis thaliana
AT4G05160 0.5kb downstream 0.5kb downstream 500 false Chr4: 2666708-2667207 Arabidopsis thaliana
AT4G05160 1.0kb upstream 1.0kb upstream 3323 true Chr4: 2663385-2666707 Arabidopsis thaliana
AT4G05160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2663385-2664384 Arabidopsis thaliana
AT4G05160 1.0kb downstream 1.0kb downstream 3323 true Chr4: 2664385-2667707 Arabidopsis thaliana
AT4G05160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2666708-2667707 Arabidopsis thaliana
AT4G05160 2.0kb upstream 2.0kb upstream 4323 true Chr4: 2662385-2666707 Arabidopsis thaliana
AT4G05160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2662385-2664384 Arabidopsis thaliana
AT4G05160 2.0kb downstream 2.0kb downstream 4323 true Chr4: 2664385-2668707 Arabidopsis thaliana
AT4G05160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2666708-2668707 Arabidopsis thaliana
AT4G05160 5.0kb upstream 5.0kb upstream 7323 true Chr4: 2659385-2666707 Arabidopsis thaliana
AT4G05160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2659385-2664384 Arabidopsis thaliana
AT4G05160 5.0kb downstream 5.0kb downstream 7323 true Chr4: 2664385-2671707 Arabidopsis thaliana
AT4G05160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2666708-2671707 Arabidopsis thaliana
AT4G05160 10.0kb upstream 10.0kb upstream 12323 true Chr4: 2654385-2666707 Arabidopsis thaliana
AT4G05160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2654385-2664384 Arabidopsis thaliana
AT4G05160 10.0kb downstream 10.0kb downstream 12323 true Chr4: 2664385-2676707 Arabidopsis thaliana
AT4G05160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2666708-2676707 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363033 5261 Brassicaceae View MSA
123829361 5264 Brassicales-Malvales View MSA
124344127 5266 SBM View MSA
124237090 5268 Malvidae View MSA
124066794 5270 Rosid View MSA
123740977 5271 Pentapetalae View MSA
122792811 5272 Eudicot View MSA
122045114 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.583        
cufflinks 10.559       Low
cufflinks 26.395     High  
cufflinks 13.293        
cufflinks 27.717     High  
cufflinks 10.157       Low

0 Strain