Gene : AT4G05150 A. thaliana TAIR10
Defline:  (1 of 38) PF00564 - PB1 domain (PB1) Genomic Order:  537
Name:  ? AT4G05150 Secondary Identifier:  ? PAC:19644046
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05150 0.5kb upstream 0.5kb upstream 3071 true Chr4: 2659838-2662908 Arabidopsis thaliana
AT4G05150 0.5kb upstream 0.5kb upstream 500 false Chr4: 2659838-2660337 Arabidopsis thaliana
AT4G05150 0.5kb downstream 0.5kb downstream 3071 true Chr4: 2660338-2663408 Arabidopsis thaliana
AT4G05150 0.5kb downstream 0.5kb downstream 500 false Chr4: 2662909-2663408 Arabidopsis thaliana
AT4G05150 1.0kb upstream 1.0kb upstream 3571 true Chr4: 2659338-2662908 Arabidopsis thaliana
AT4G05150 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2659338-2660337 Arabidopsis thaliana
AT4G05150 1.0kb downstream 1.0kb downstream 3571 true Chr4: 2660338-2663908 Arabidopsis thaliana
AT4G05150 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2662909-2663908 Arabidopsis thaliana
AT4G05150 2.0kb upstream 2.0kb upstream 4571 true Chr4: 2658338-2662908 Arabidopsis thaliana
AT4G05150 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2658338-2660337 Arabidopsis thaliana
AT4G05150 2.0kb downstream 2.0kb downstream 4571 true Chr4: 2660338-2664908 Arabidopsis thaliana
AT4G05150 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2662909-2664908 Arabidopsis thaliana
AT4G05150 5.0kb upstream 5.0kb upstream 7571 true Chr4: 2655338-2662908 Arabidopsis thaliana
AT4G05150 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2655338-2660337 Arabidopsis thaliana
AT4G05150 5.0kb downstream 5.0kb downstream 7571 true Chr4: 2660338-2667908 Arabidopsis thaliana
AT4G05150 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2662909-2667908 Arabidopsis thaliana
AT4G05150 10.0kb upstream 10.0kb upstream 12571 true Chr4: 2650338-2662908 Arabidopsis thaliana
AT4G05150 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2650338-2660337 Arabidopsis thaliana
AT4G05150 10.0kb downstream 10.0kb downstream 12571 true Chr4: 2660338-2672908 Arabidopsis thaliana
AT4G05150 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2662909-2672908 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364560 5261 Brassicaceae View MSA
123840833 5264 Brassicales-Malvales View MSA
124345749 5266 SBM View MSA
124253150 5268 Malvidae View MSA
124050389 5270 Rosid View MSA
123750772 5271 Pentapetalae View MSA
122787571 5272 Eudicot View MSA
122050894 5273 Angiosperm View MSA
121312193 5274 Embryophyte View MSA
123349392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.109     High  
cufflinks 57.532     High  
cufflinks 68.075     High  
cufflinks 55.638     High  
cufflinks 78.958     High High
cufflinks 32.098     High Low

0 Strain