Gene : AT4G05030 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22814//PTHR22814:SF157 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  521
Name:  ? AT4G05030 Secondary Identifier:  ? PAC:19645384
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05030 0.5kb upstream 0.5kb upstream 1685 true Chr4: 2576790-2578474 Arabidopsis thaliana
AT4G05030 0.5kb upstream 0.5kb upstream 500 false Chr4: 2577975-2578474 Arabidopsis thaliana
AT4G05030 0.5kb downstream 0.5kb downstream 1685 true Chr4: 2576290-2577974 Arabidopsis thaliana
AT4G05030 0.5kb downstream 0.5kb downstream 500 false Chr4: 2576290-2576789 Arabidopsis thaliana
AT4G05030 1.0kb upstream 1.0kb upstream 2185 true Chr4: 2576790-2578974 Arabidopsis thaliana
AT4G05030 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2577975-2578974 Arabidopsis thaliana
AT4G05030 1.0kb downstream 1.0kb downstream 2185 true Chr4: 2575790-2577974 Arabidopsis thaliana
AT4G05030 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2575790-2576789 Arabidopsis thaliana
AT4G05030 2.0kb upstream 2.0kb upstream 3185 true Chr4: 2576790-2579974 Arabidopsis thaliana
AT4G05030 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2577975-2579974 Arabidopsis thaliana
AT4G05030 2.0kb downstream 2.0kb downstream 3185 true Chr4: 2574790-2577974 Arabidopsis thaliana
AT4G05030 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2574790-2576789 Arabidopsis thaliana
AT4G05030 5.0kb upstream 5.0kb upstream 6185 true Chr4: 2576790-2582974 Arabidopsis thaliana
AT4G05030 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2577975-2582974 Arabidopsis thaliana
AT4G05030 5.0kb downstream 5.0kb downstream 6185 true Chr4: 2571790-2577974 Arabidopsis thaliana
AT4G05030 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2571790-2576789 Arabidopsis thaliana
AT4G05030 10.0kb upstream 10.0kb upstream 11185 true Chr4: 2576790-2587974 Arabidopsis thaliana
AT4G05030 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2577975-2587974 Arabidopsis thaliana
AT4G05030 10.0kb downstream 10.0kb downstream 11185 true Chr4: 2566790-2577974 Arabidopsis thaliana
AT4G05030 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2566790-2576789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330500 5261 Brassicaceae Singleton cluster - no MSA
123771741 5264 Brassicales-Malvales Singleton cluster - no MSA
124270267 5266 SBM Singleton cluster - no MSA
124254447 5268 Malvidae View MSA
124072357 5270 Rosid View MSA
123753587 5271 Pentapetalae View MSA
122796697 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.345        
cufflinks 0.473        
cufflinks 0.046     Low Low
cufflinks 0.41     Low  
cufflinks 0.096     Low  
cufflinks 0.642        

0 Strain