Gene : AT4G05070 A. thaliana TAIR10
Defline:  (1 of 6) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  525
Name:  ? AT4G05070 Secondary Identifier:  ? PAC:19646871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05070 0.5kb upstream 0.5kb upstream 1025 true Chr4: 2593595-2594619 Arabidopsis thaliana
AT4G05070 0.5kb upstream 0.5kb upstream 500 false Chr4: 2594120-2594619 Arabidopsis thaliana
AT4G05070 0.5kb downstream 0.5kb downstream 1025 true Chr4: 2593095-2594119 Arabidopsis thaliana
AT4G05070 0.5kb downstream 0.5kb downstream 500 false Chr4: 2593095-2593594 Arabidopsis thaliana
AT4G05070 1.0kb upstream 1.0kb upstream 1525 true Chr4: 2593595-2595119 Arabidopsis thaliana
AT4G05070 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2594120-2595119 Arabidopsis thaliana
AT4G05070 1.0kb downstream 1.0kb downstream 1525 true Chr4: 2592595-2594119 Arabidopsis thaliana
AT4G05070 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2592595-2593594 Arabidopsis thaliana
AT4G05070 2.0kb upstream 2.0kb upstream 2525 true Chr4: 2593595-2596119 Arabidopsis thaliana
AT4G05070 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2594120-2596119 Arabidopsis thaliana
AT4G05070 2.0kb downstream 2.0kb downstream 2525 true Chr4: 2591595-2594119 Arabidopsis thaliana
AT4G05070 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2591595-2593594 Arabidopsis thaliana
AT4G05070 5.0kb upstream 5.0kb upstream 5525 true Chr4: 2593595-2599119 Arabidopsis thaliana
AT4G05070 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2594120-2599119 Arabidopsis thaliana
AT4G05070 5.0kb downstream 5.0kb downstream 5525 true Chr4: 2588595-2594119 Arabidopsis thaliana
AT4G05070 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2588595-2593594 Arabidopsis thaliana
AT4G05070 10.0kb upstream 10.0kb upstream 10525 true Chr4: 2593595-2604119 Arabidopsis thaliana
AT4G05070 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2594120-2604119 Arabidopsis thaliana
AT4G05070 10.0kb downstream 10.0kb downstream 10525 true Chr4: 2583595-2594119 Arabidopsis thaliana
AT4G05070 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2583595-2593594 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370847 5261 Brassicaceae View MSA
123800053 5264 Brassicales-Malvales View MSA
124297510 5266 SBM View MSA
124253549 5268 Malvidae View MSA
124051039 5270 Rosid View MSA
123752736 5271 Pentapetalae View MSA
122795742 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 104.572     High  
cufflinks 33.821     High  
cufflinks 112.622     High  
cufflinks 41.428     High  
cufflinks 205.386     High High
cufflinks 35.539     High  

0 Strain