Gene : AT4G05010 A. thaliana TAIR10
Defline:  (1 of 518) PF00646 - F-box domain (F-box) Genomic Order:  518
Name:  ? AT4G05010 Secondary Identifier:  ? PAC:19647406
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05010 0.5kb upstream 0.5kb upstream 1189 true Chr4: 2566974-2568162 Arabidopsis thaliana
AT4G05010 0.5kb upstream 0.5kb upstream 500 false Chr4: 2566974-2567473 Arabidopsis thaliana
AT4G05010 0.5kb downstream 0.5kb downstream 1189 true Chr4: 2567474-2568662 Arabidopsis thaliana
AT4G05010 0.5kb downstream 0.5kb downstream 500 false Chr4: 2568163-2568662 Arabidopsis thaliana
AT4G05010 1.0kb upstream 1.0kb upstream 1689 true Chr4: 2566474-2568162 Arabidopsis thaliana
AT4G05010 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2566474-2567473 Arabidopsis thaliana
AT4G05010 1.0kb downstream 1.0kb downstream 1689 true Chr4: 2567474-2569162 Arabidopsis thaliana
AT4G05010 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2568163-2569162 Arabidopsis thaliana
AT4G05010 2.0kb upstream 2.0kb upstream 2689 true Chr4: 2565474-2568162 Arabidopsis thaliana
AT4G05010 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2565474-2567473 Arabidopsis thaliana
AT4G05010 2.0kb downstream 2.0kb downstream 2689 true Chr4: 2567474-2570162 Arabidopsis thaliana
AT4G05010 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2568163-2570162 Arabidopsis thaliana
AT4G05010 5.0kb upstream 5.0kb upstream 5689 true Chr4: 2562474-2568162 Arabidopsis thaliana
AT4G05010 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2562474-2567473 Arabidopsis thaliana
AT4G05010 5.0kb downstream 5.0kb downstream 5689 true Chr4: 2567474-2573162 Arabidopsis thaliana
AT4G05010 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2568163-2573162 Arabidopsis thaliana
AT4G05010 10.0kb upstream 10.0kb upstream 10689 true Chr4: 2557474-2568162 Arabidopsis thaliana
AT4G05010 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2557474-2567473 Arabidopsis thaliana
AT4G05010 10.0kb downstream 10.0kb downstream 10689 true Chr4: 2567474-2578162 Arabidopsis thaliana
AT4G05010 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2568163-2578162 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049997 5273 Angiosperm View MSA
122368658 5261 Brassicaceae View MSA
123799629 5264 Brassicales-Malvales View MSA
124297131 5266 SBM View MSA
124149098 5268 Malvidae View MSA
124063165 5270 Rosid View MSA
123746999 5271 Pentapetalae View MSA
122794016 5272 Eudicot View MSA
121346650 5274 Embryophyte View MSA
123380419 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.027       Low
cufflinks 49.462     High High
cufflinks 12.383        
cufflinks 41.134     High  
cufflinks 9.109       Low
cufflinks 41.998     High  

0 Strain