Gene : PCFS4 A. thaliana TAIR10
Primary Identifier:  ? AT4G04885 Defline:  (1 of 4) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11)
Genomic Order:  499 Name:  ? AT4G04885
Secondary Identifier:  ? PAC:19645002
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G04885 0.5kb upstream 0.5kb upstream 4510 true Chr4: 2471472-2475981 Arabidopsis thaliana
AT4G04885 0.5kb upstream 0.5kb upstream 500 false Chr4: 2471472-2471971 Arabidopsis thaliana
AT4G04885 0.5kb downstream 0.5kb downstream 4510 true Chr4: 2471972-2476481 Arabidopsis thaliana
AT4G04885 0.5kb downstream 0.5kb downstream 500 false Chr4: 2475982-2476481 Arabidopsis thaliana
AT4G04885 1.0kb upstream 1.0kb upstream 5010 true Chr4: 2470972-2475981 Arabidopsis thaliana
AT4G04885 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2470972-2471971 Arabidopsis thaliana
AT4G04885 1.0kb downstream 1.0kb downstream 5010 true Chr4: 2471972-2476981 Arabidopsis thaliana
AT4G04885 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2475982-2476981 Arabidopsis thaliana
AT4G04885 2.0kb upstream 2.0kb upstream 6010 true Chr4: 2469972-2475981 Arabidopsis thaliana
AT4G04885 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2469972-2471971 Arabidopsis thaliana
AT4G04885 2.0kb downstream 2.0kb downstream 6010 true Chr4: 2471972-2477981 Arabidopsis thaliana
AT4G04885 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2475982-2477981 Arabidopsis thaliana
AT4G04885 5.0kb upstream 5.0kb upstream 9010 true Chr4: 2466972-2475981 Arabidopsis thaliana
AT4G04885 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2466972-2471971 Arabidopsis thaliana
AT4G04885 5.0kb downstream 5.0kb downstream 9010 true Chr4: 2471972-2480981 Arabidopsis thaliana
AT4G04885 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2475982-2480981 Arabidopsis thaliana
AT4G04885 10.0kb upstream 10.0kb upstream 14010 true Chr4: 2461972-2475981 Arabidopsis thaliana
AT4G04885 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2461972-2471971 Arabidopsis thaliana
AT4G04885 10.0kb downstream 10.0kb downstream 14010 true Chr4: 2471972-2485981 Arabidopsis thaliana
AT4G04885 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2475982-2485981 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373990 5261 Brassicaceae View MSA
123827998 5264 Brassicales-Malvales View MSA
124346804 5266 SBM View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.702        
cufflinks 7.856        
cufflinks 7.313        
cufflinks 8.54       High
cufflinks 7.049       Low
cufflinks 8.039        

0 Strain