Gene : PMP22 A. thaliana TAIR10
Primary Identifier:  ? AT4G04470 Defline:  (1 of 2) K13347 - peroxisomal membrane protein 2 (PXMP2, PMP22)
Genomic Order:  459 Name:  ? AT4G04470
Secondary Identifier:  ? PAC:19645136
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G04470 0.5kb upstream 0.5kb upstream 2120 true Chr4: 2227661-2229780 Arabidopsis thaliana
AT4G04470 0.5kb upstream 0.5kb upstream 500 false Chr4: 2229281-2229780 Arabidopsis thaliana
AT4G04470 0.5kb downstream 0.5kb downstream 2120 true Chr4: 2227161-2229280 Arabidopsis thaliana
AT4G04470 0.5kb downstream 0.5kb downstream 500 false Chr4: 2227161-2227660 Arabidopsis thaliana
AT4G04470 1.0kb upstream 1.0kb upstream 2620 true Chr4: 2227661-2230280 Arabidopsis thaliana
AT4G04470 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2229281-2230280 Arabidopsis thaliana
AT4G04470 1.0kb downstream 1.0kb downstream 2620 true Chr4: 2226661-2229280 Arabidopsis thaliana
AT4G04470 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2226661-2227660 Arabidopsis thaliana
AT4G04470 2.0kb upstream 2.0kb upstream 3620 true Chr4: 2227661-2231280 Arabidopsis thaliana
AT4G04470 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2229281-2231280 Arabidopsis thaliana
AT4G04470 2.0kb downstream 2.0kb downstream 3620 true Chr4: 2225661-2229280 Arabidopsis thaliana
AT4G04470 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2225661-2227660 Arabidopsis thaliana
AT4G04470 5.0kb upstream 5.0kb upstream 6620 true Chr4: 2227661-2234280 Arabidopsis thaliana
AT4G04470 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2229281-2234280 Arabidopsis thaliana
AT4G04470 5.0kb downstream 5.0kb downstream 6620 true Chr4: 2222661-2229280 Arabidopsis thaliana
AT4G04470 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2222661-2227660 Arabidopsis thaliana
AT4G04470 10.0kb upstream 10.0kb upstream 11620 true Chr4: 2227661-2239280 Arabidopsis thaliana
AT4G04470 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2229281-2239280 Arabidopsis thaliana
AT4G04470 10.0kb downstream 10.0kb downstream 11620 true Chr4: 2217661-2229280 Arabidopsis thaliana
AT4G04470 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2217661-2227660 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370529 5261 Brassicaceae View MSA
123829165 5264 Brassicales-Malvales View MSA
124346835 5266 SBM View MSA
124248138 5268 Malvidae View MSA
124069781 5270 Rosid View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.305        
cufflinks 18.064        
cufflinks 19.374        
cufflinks 17.959        
cufflinks 21.304       High
cufflinks 14.55       Low

0 Strain