Gene : ISU3 A. thaliana TAIR10
Primary Identifier:  ? AT4G04080 Defline:  (1 of 1) K04488 - nitrogen fixation protein NifU and related proteins (iscU, nifU)
Genomic Order:  439 Name:  ? AT4G04080
Secondary Identifier:  ? PAC:19645585
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G04080 0.5kb upstream 0.5kb upstream 1566 true Chr4: 1962858-1964423 Arabidopsis thaliana
AT4G04080 0.5kb upstream 0.5kb upstream 500 false Chr4: 1962858-1963357 Arabidopsis thaliana
AT4G04080 0.5kb downstream 0.5kb downstream 1566 true Chr4: 1963358-1964923 Arabidopsis thaliana
AT4G04080 0.5kb downstream 0.5kb downstream 500 false Chr4: 1964424-1964923 Arabidopsis thaliana
AT4G04080 1.0kb upstream 1.0kb upstream 2066 true Chr4: 1962358-1964423 Arabidopsis thaliana
AT4G04080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1962358-1963357 Arabidopsis thaliana
AT4G04080 1.0kb downstream 1.0kb downstream 2066 true Chr4: 1963358-1965423 Arabidopsis thaliana
AT4G04080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1964424-1965423 Arabidopsis thaliana
AT4G04080 2.0kb upstream 2.0kb upstream 3066 true Chr4: 1961358-1964423 Arabidopsis thaliana
AT4G04080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1961358-1963357 Arabidopsis thaliana
AT4G04080 2.0kb downstream 2.0kb downstream 3066 true Chr4: 1963358-1966423 Arabidopsis thaliana
AT4G04080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1964424-1966423 Arabidopsis thaliana
AT4G04080 5.0kb upstream 5.0kb upstream 6066 true Chr4: 1958358-1964423 Arabidopsis thaliana
AT4G04080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1958358-1963357 Arabidopsis thaliana
AT4G04080 5.0kb downstream 5.0kb downstream 6066 true Chr4: 1963358-1969423 Arabidopsis thaliana
AT4G04080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1964424-1969423 Arabidopsis thaliana
AT4G04080 10.0kb upstream 10.0kb upstream 11066 true Chr4: 1953358-1964423 Arabidopsis thaliana
AT4G04080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1953358-1963357 Arabidopsis thaliana
AT4G04080 10.0kb downstream 10.0kb downstream 11066 true Chr4: 1963358-1974423 Arabidopsis thaliana
AT4G04080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1964424-1974423 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376540 5261 Brassicaceae View MSA
123801281 5264 Brassicales-Malvales View MSA
124298603 5266 SBM View MSA
124150208 5268 Malvidae View MSA
123875866 5270 Rosid View MSA
123459621 5271 Pentapetalae View MSA
122495011 5272 Eudicot View MSA
122051414 5273 Angiosperm View MSA
121312473 5274 Embryophyte View MSA
123349644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain