Gene : AT4G10200 A. thaliana TAIR10
Defline:  (1 of 5) PTHR11697:SF116 - AC-LIKE TRANSPOSASE-RELATED Genomic Order:  837
Name:  ? AT4G10200 Secondary Identifier:  ? PAC:19645969
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10200 0.5kb upstream 0.5kb upstream 2920 true Chr4: 6352672-6355591 Arabidopsis thaliana
AT4G10200 0.5kb upstream 0.5kb upstream 500 false Chr4: 6352672-6353171 Arabidopsis thaliana
AT4G10200 0.5kb downstream 0.5kb downstream 2920 true Chr4: 6353172-6356091 Arabidopsis thaliana
AT4G10200 0.5kb downstream 0.5kb downstream 500 false Chr4: 6355592-6356091 Arabidopsis thaliana
AT4G10200 1.0kb upstream 1.0kb upstream 3420 true Chr4: 6352172-6355591 Arabidopsis thaliana
AT4G10200 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6352172-6353171 Arabidopsis thaliana
AT4G10200 1.0kb downstream 1.0kb downstream 3420 true Chr4: 6353172-6356591 Arabidopsis thaliana
AT4G10200 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6355592-6356591 Arabidopsis thaliana
AT4G10200 2.0kb upstream 2.0kb upstream 4420 true Chr4: 6351172-6355591 Arabidopsis thaliana
AT4G10200 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6351172-6353171 Arabidopsis thaliana
AT4G10200 2.0kb downstream 2.0kb downstream 4420 true Chr4: 6353172-6357591 Arabidopsis thaliana
AT4G10200 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6355592-6357591 Arabidopsis thaliana
AT4G10200 5.0kb upstream 5.0kb upstream 7420 true Chr4: 6348172-6355591 Arabidopsis thaliana
AT4G10200 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6348172-6353171 Arabidopsis thaliana
AT4G10200 5.0kb downstream 5.0kb downstream 7420 true Chr4: 6353172-6360591 Arabidopsis thaliana
AT4G10200 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6355592-6360591 Arabidopsis thaliana
AT4G10200 10.0kb upstream 10.0kb upstream 12420 true Chr4: 6343172-6355591 Arabidopsis thaliana
AT4G10200 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6343172-6353171 Arabidopsis thaliana
AT4G10200 10.0kb downstream 10.0kb downstream 12420 true Chr4: 6353172-6365591 Arabidopsis thaliana
AT4G10200 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6355592-6365591 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029782 5273 Angiosperm View MSA
122379387 5261 Brassicaceae View MSA
123802241 5264 Brassicales-Malvales View MSA
124299453 5266 SBM View MSA
124150863 5268 Malvidae View MSA
124038396 5270 Rosid View MSA
123752938 5271 Pentapetalae View MSA
122797889 5272 Eudicot View MSA
121351340 5274 Embryophyte View MSA
123426120 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.031     Low  
cufflinks 0.053     Low High
cufflinks 0.026     Low  
cufflinks 0.044     Low  
cufflinks 0.013     Low Low

0 Strain