Gene : AT4G10280 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33271//PTHR33271:SF1 - FAMILY NOT NAMED // RMLC-LIKE CUPINS SUPERFAMILY PROTEIN Genomic Order:  846
Name:  ? AT4G10280 Secondary Identifier:  ? PAC:19645802
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10280 0.5kb upstream 0.5kb upstream 1487 true Chr4: 6375125-6376611 Arabidopsis thaliana
AT4G10280 0.5kb upstream 0.5kb upstream 500 false Chr4: 6376112-6376611 Arabidopsis thaliana
AT4G10280 0.5kb downstream 0.5kb downstream 1487 true Chr4: 6374625-6376111 Arabidopsis thaliana
AT4G10280 0.5kb downstream 0.5kb downstream 500 false Chr4: 6374625-6375124 Arabidopsis thaliana
AT4G10280 1.0kb upstream 1.0kb upstream 1987 true Chr4: 6375125-6377111 Arabidopsis thaliana
AT4G10280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6376112-6377111 Arabidopsis thaliana
AT4G10280 1.0kb downstream 1.0kb downstream 1987 true Chr4: 6374125-6376111 Arabidopsis thaliana
AT4G10280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6374125-6375124 Arabidopsis thaliana
AT4G10280 2.0kb upstream 2.0kb upstream 2987 true Chr4: 6375125-6378111 Arabidopsis thaliana
AT4G10280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6376112-6378111 Arabidopsis thaliana
AT4G10280 2.0kb downstream 2.0kb downstream 2987 true Chr4: 6373125-6376111 Arabidopsis thaliana
AT4G10280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6373125-6375124 Arabidopsis thaliana
AT4G10280 5.0kb upstream 5.0kb upstream 5987 true Chr4: 6375125-6381111 Arabidopsis thaliana
AT4G10280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6376112-6381111 Arabidopsis thaliana
AT4G10280 5.0kb downstream 5.0kb downstream 5987 true Chr4: 6370125-6376111 Arabidopsis thaliana
AT4G10280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6370125-6375124 Arabidopsis thaliana
AT4G10280 10.0kb upstream 10.0kb upstream 10987 true Chr4: 6375125-6386111 Arabidopsis thaliana
AT4G10280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6376112-6386111 Arabidopsis thaliana
AT4G10280 10.0kb downstream 10.0kb downstream 10987 true Chr4: 6365125-6376111 Arabidopsis thaliana
AT4G10280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6365125-6375124 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372093 5261 Brassicaceae View MSA
123800295 5264 Brassicales-Malvales View MSA
124351523 5266 SBM View MSA
124244773 5268 Malvidae View MSA
124070378 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.552       Low
cufflinks 18.718       High
cufflinks 8.923        
cufflinks 17.879        
cufflinks 8.587        
cufflinks 16.583        

0 Strain