Gene : AT4G10080 A. thaliana TAIR10
Genomic Order:  823 Name:  ? AT4G10080
Secondary Identifier:  ? PAC:19647107
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10080 0.5kb upstream 0.5kb upstream 3097 true Chr4: 6300058-6303154 Arabidopsis thaliana
AT4G10080 0.5kb upstream 0.5kb upstream 500 false Chr4: 6302655-6303154 Arabidopsis thaliana
AT4G10080 0.5kb downstream 0.5kb downstream 3097 true Chr4: 6299558-6302654 Arabidopsis thaliana
AT4G10080 0.5kb downstream 0.5kb downstream 500 false Chr4: 6299558-6300057 Arabidopsis thaliana
AT4G10080 1.0kb upstream 1.0kb upstream 3597 true Chr4: 6300058-6303654 Arabidopsis thaliana
AT4G10080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6302655-6303654 Arabidopsis thaliana
AT4G10080 1.0kb downstream 1.0kb downstream 3597 true Chr4: 6299058-6302654 Arabidopsis thaliana
AT4G10080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6299058-6300057 Arabidopsis thaliana
AT4G10080 2.0kb upstream 2.0kb upstream 4597 true Chr4: 6300058-6304654 Arabidopsis thaliana
AT4G10080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6302655-6304654 Arabidopsis thaliana
AT4G10080 2.0kb downstream 2.0kb downstream 4597 true Chr4: 6298058-6302654 Arabidopsis thaliana
AT4G10080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6298058-6300057 Arabidopsis thaliana
AT4G10080 5.0kb upstream 5.0kb upstream 7597 true Chr4: 6300058-6307654 Arabidopsis thaliana
AT4G10080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6302655-6307654 Arabidopsis thaliana
AT4G10080 5.0kb downstream 5.0kb downstream 7597 true Chr4: 6295058-6302654 Arabidopsis thaliana
AT4G10080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6295058-6300057 Arabidopsis thaliana
AT4G10080 10.0kb upstream 10.0kb upstream 12597 true Chr4: 6300058-6312654 Arabidopsis thaliana
AT4G10080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6302655-6312654 Arabidopsis thaliana
AT4G10080 10.0kb downstream 10.0kb downstream 12597 true Chr4: 6290058-6302654 Arabidopsis thaliana
AT4G10080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6290058-6300057 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028016 5273 Angiosperm View MSA
122362234 5261 Brassicaceae View MSA
123833760 5264 Brassicales-Malvales View MSA
124349581 5266 SBM View MSA
124251137 5268 Malvidae View MSA
124066244 5270 Rosid View MSA
123739100 5271 Pentapetalae View MSA
122796008 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.889     High High
cufflinks 21.052        
cufflinks 39.543     High  
cufflinks 23.629        
cufflinks 47.115     High  
cufflinks 18.313       Low

0 Strain