Gene : AT4G09990 A. thaliana TAIR10
Defline:  (1 of 4) K18801 - glucuronoxylan 4-O-methyltransferase (GXM) Genomic Order:  814
Name:  ? AT4G09990 Secondary Identifier:  ? PAC:19644356
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09990 0.5kb upstream 0.5kb upstream 1694 true Chr4: 6258880-6260573 Arabidopsis thaliana
AT4G09990 0.5kb upstream 0.5kb upstream 500 false Chr4: 6260074-6260573 Arabidopsis thaliana
AT4G09990 0.5kb downstream 0.5kb downstream 1694 true Chr4: 6258380-6260073 Arabidopsis thaliana
AT4G09990 0.5kb downstream 0.5kb downstream 500 false Chr4: 6258380-6258879 Arabidopsis thaliana
AT4G09990 1.0kb upstream 1.0kb upstream 2194 true Chr4: 6258880-6261073 Arabidopsis thaliana
AT4G09990 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6260074-6261073 Arabidopsis thaliana
AT4G09990 1.0kb downstream 1.0kb downstream 2194 true Chr4: 6257880-6260073 Arabidopsis thaliana
AT4G09990 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6257880-6258879 Arabidopsis thaliana
AT4G09990 2.0kb upstream 2.0kb upstream 3194 true Chr4: 6258880-6262073 Arabidopsis thaliana
AT4G09990 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6260074-6262073 Arabidopsis thaliana
AT4G09990 2.0kb downstream 2.0kb downstream 3194 true Chr4: 6256880-6260073 Arabidopsis thaliana
AT4G09990 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6256880-6258879 Arabidopsis thaliana
AT4G09990 5.0kb upstream 5.0kb upstream 6194 true Chr4: 6258880-6265073 Arabidopsis thaliana
AT4G09990 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6260074-6265073 Arabidopsis thaliana
AT4G09990 5.0kb downstream 5.0kb downstream 6194 true Chr4: 6253880-6260073 Arabidopsis thaliana
AT4G09990 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6253880-6258879 Arabidopsis thaliana
AT4G09990 10.0kb upstream 10.0kb upstream 11194 true Chr4: 6258880-6270073 Arabidopsis thaliana
AT4G09990 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6260074-6270073 Arabidopsis thaliana
AT4G09990 10.0kb downstream 10.0kb downstream 11194 true Chr4: 6248880-6260073 Arabidopsis thaliana
AT4G09990 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6248880-6258879 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377425 5261 Brassicaceae View MSA
123838153 5264 Brassicales-Malvales View MSA
124339400 5266 SBM View MSA
124238600 5268 Malvidae View MSA
124067239 5270 Rosid View MSA
123751562 5271 Pentapetalae View MSA
122790835 5272 Eudicot View MSA
122042282 5273 Angiosperm View MSA
121349069 5274 Embryophyte View MSA
123381149 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.845        
cufflinks 3.954        
cufflinks 0.764        
cufflinks 6.38        
cufflinks 0.729        
cufflinks 9.234       High

0 Strain