Gene : AT4G09920 A. thaliana TAIR10
Defline:  (1 of 44) PTHR32212//PTHR32212:SF112 - FAMILY NOT NAMED // FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  805
Name:  ? AT4G09920 Secondary Identifier:  ? PAC:19647034
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09920 0.5kb upstream 0.5kb upstream 1715 true Chr4: 6224191-6225905 Arabidopsis thaliana
AT4G09920 0.5kb upstream 0.5kb upstream 500 false Chr4: 6224191-6224690 Arabidopsis thaliana
AT4G09920 0.5kb downstream 0.5kb downstream 1715 true Chr4: 6224691-6226405 Arabidopsis thaliana
AT4G09920 0.5kb downstream 0.5kb downstream 500 false Chr4: 6225906-6226405 Arabidopsis thaliana
AT4G09920 1.0kb upstream 1.0kb upstream 2215 true Chr4: 6223691-6225905 Arabidopsis thaliana
AT4G09920 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6223691-6224690 Arabidopsis thaliana
AT4G09920 1.0kb downstream 1.0kb downstream 2215 true Chr4: 6224691-6226905 Arabidopsis thaliana
AT4G09920 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6225906-6226905 Arabidopsis thaliana
AT4G09920 2.0kb upstream 2.0kb upstream 3215 true Chr4: 6222691-6225905 Arabidopsis thaliana
AT4G09920 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6222691-6224690 Arabidopsis thaliana
AT4G09920 2.0kb downstream 2.0kb downstream 3215 true Chr4: 6224691-6227905 Arabidopsis thaliana
AT4G09920 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6225906-6227905 Arabidopsis thaliana
AT4G09920 5.0kb upstream 5.0kb upstream 6215 true Chr4: 6219691-6225905 Arabidopsis thaliana
AT4G09920 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6219691-6224690 Arabidopsis thaliana
AT4G09920 5.0kb downstream 5.0kb downstream 6215 true Chr4: 6224691-6230905 Arabidopsis thaliana
AT4G09920 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6225906-6230905 Arabidopsis thaliana
AT4G09920 10.0kb upstream 10.0kb upstream 11215 true Chr4: 6214691-6225905 Arabidopsis thaliana
AT4G09920 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6214691-6224690 Arabidopsis thaliana
AT4G09920 10.0kb downstream 10.0kb downstream 11215 true Chr4: 6224691-6235905 Arabidopsis thaliana
AT4G09920 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6225906-6235905 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381980 5261 Brassicaceae View MSA
123803580 5264 Brassicales-Malvales View MSA
124351724 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.957        
cufflinks 2.698       High
cufflinks 0.906        
cufflinks 1.906        
cufflinks 0.838       Low
cufflinks 2.154        

0 Strain