Gene : TT8 A. thaliana TAIR10
Primary Identifier:  ? AT4G09820 Defline:  (1 of 1) PTHR11514//PTHR11514:SF28 - MYC // TRANSCRIPTION FACTOR TT8
Genomic Order:  796 Name:  ? AT4G09820
Secondary Identifier:  ? PAC:19644597
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09820 0.5kb upstream 0.5kb upstream 4971 true Chr4: 6181523-6186493 Arabidopsis thaliana
AT4G09820 0.5kb upstream 0.5kb upstream 500 false Chr4: 6181523-6182022 Arabidopsis thaliana
AT4G09820 0.5kb downstream 0.5kb downstream 4971 true Chr4: 6182023-6186993 Arabidopsis thaliana
AT4G09820 0.5kb downstream 0.5kb downstream 500 false Chr4: 6186494-6186993 Arabidopsis thaliana
AT4G09820 1.0kb upstream 1.0kb upstream 5471 true Chr4: 6181023-6186493 Arabidopsis thaliana
AT4G09820 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6181023-6182022 Arabidopsis thaliana
AT4G09820 1.0kb downstream 1.0kb downstream 5471 true Chr4: 6182023-6187493 Arabidopsis thaliana
AT4G09820 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6186494-6187493 Arabidopsis thaliana
AT4G09820 2.0kb upstream 2.0kb upstream 6471 true Chr4: 6180023-6186493 Arabidopsis thaliana
AT4G09820 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6180023-6182022 Arabidopsis thaliana
AT4G09820 2.0kb downstream 2.0kb downstream 6471 true Chr4: 6182023-6188493 Arabidopsis thaliana
AT4G09820 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6186494-6188493 Arabidopsis thaliana
AT4G09820 5.0kb upstream 5.0kb upstream 9471 true Chr4: 6177023-6186493 Arabidopsis thaliana
AT4G09820 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6177023-6182022 Arabidopsis thaliana
AT4G09820 5.0kb downstream 5.0kb downstream 9471 true Chr4: 6182023-6191493 Arabidopsis thaliana
AT4G09820 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6186494-6191493 Arabidopsis thaliana
AT4G09820 10.0kb upstream 10.0kb upstream 14471 true Chr4: 6172023-6186493 Arabidopsis thaliana
AT4G09820 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6172023-6182022 Arabidopsis thaliana
AT4G09820 10.0kb downstream 10.0kb downstream 14471 true Chr4: 6182023-6196493 Arabidopsis thaliana
AT4G09820 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6186494-6196493 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372027 5261 Brassicaceae View MSA
123839155 5264 Brassicales-Malvales View MSA
124322566 5266 SBM View MSA
124245361 5268 Malvidae View MSA
124064809 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306       High
cufflinks 0.047     Low  
cufflinks 0.13     Low  
cufflinks 0.135     Low  
cufflinks 0.227     Low  
cufflinks 0.029     Low Low

0 Strain