Gene : RPS18C A. thaliana TAIR10
Primary Identifier:  ? AT4G09800 Defline:  (1 of 3) K02964 - small subunit ribosomal protein S18e (RP-S18e, RPS18)
Genomic Order:  794 Name:  ? AT4G09800
Secondary Identifier:  ? PAC:19647343
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09800 0.5kb upstream 0.5kb upstream 1986 true Chr4: 6173215-6175200 Arabidopsis thaliana
AT4G09800 0.5kb upstream 0.5kb upstream 500 false Chr4: 6173215-6173714 Arabidopsis thaliana
AT4G09800 0.5kb downstream 0.5kb downstream 1986 true Chr4: 6173715-6175700 Arabidopsis thaliana
AT4G09800 0.5kb downstream 0.5kb downstream 500 false Chr4: 6175201-6175700 Arabidopsis thaliana
AT4G09800 1.0kb upstream 1.0kb upstream 2486 true Chr4: 6172715-6175200 Arabidopsis thaliana
AT4G09800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6172715-6173714 Arabidopsis thaliana
AT4G09800 1.0kb downstream 1.0kb downstream 2486 true Chr4: 6173715-6176200 Arabidopsis thaliana
AT4G09800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6175201-6176200 Arabidopsis thaliana
AT4G09800 2.0kb upstream 2.0kb upstream 3486 true Chr4: 6171715-6175200 Arabidopsis thaliana
AT4G09800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6171715-6173714 Arabidopsis thaliana
AT4G09800 2.0kb downstream 2.0kb downstream 3486 true Chr4: 6173715-6177200 Arabidopsis thaliana
AT4G09800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6175201-6177200 Arabidopsis thaliana
AT4G09800 5.0kb upstream 5.0kb upstream 6486 true Chr4: 6168715-6175200 Arabidopsis thaliana
AT4G09800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6168715-6173714 Arabidopsis thaliana
AT4G09800 5.0kb downstream 5.0kb downstream 6486 true Chr4: 6173715-6180200 Arabidopsis thaliana
AT4G09800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6175201-6180200 Arabidopsis thaliana
AT4G09800 10.0kb upstream 10.0kb upstream 11486 true Chr4: 6163715-6175200 Arabidopsis thaliana
AT4G09800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6163715-6173714 Arabidopsis thaliana
AT4G09800 10.0kb downstream 10.0kb downstream 11486 true Chr4: 6173715-6185200 Arabidopsis thaliana
AT4G09800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6175201-6185200 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376535 5261 Brassicaceae View MSA
123841157 5264 Brassicales-Malvales View MSA
124344283 5266 SBM View MSA
124249653 5268 Malvidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 129.535     High  
cufflinks 231.829     High High
cufflinks 142.916     High  
cufflinks 215.602     High  
cufflinks 119.489     High Low
cufflinks 202.022     High  

0 Strain