Gene : GIP1 A. thaliana TAIR10
Primary Identifier:  ? AT4G09550 Defline:  (1 of 2) K18633 - mitotic-spindle organizing protein 1 (MZT1, GIP1, GIP2)
Genomic Order:  765 Name:  ? AT4G09550
Secondary Identifier:  ? PAC:19645913
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09550 0.5kb upstream 0.5kb upstream 1598 true Chr4: 6038618-6040215 Arabidopsis thaliana
AT4G09550 0.5kb upstream 0.5kb upstream 500 false Chr4: 6038618-6039117 Arabidopsis thaliana
AT4G09550 0.5kb downstream 0.5kb downstream 1598 true Chr4: 6039118-6040715 Arabidopsis thaliana
AT4G09550 0.5kb downstream 0.5kb downstream 500 false Chr4: 6040216-6040715 Arabidopsis thaliana
AT4G09550 1.0kb upstream 1.0kb upstream 2098 true Chr4: 6038118-6040215 Arabidopsis thaliana
AT4G09550 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6038118-6039117 Arabidopsis thaliana
AT4G09550 1.0kb downstream 1.0kb downstream 2098 true Chr4: 6039118-6041215 Arabidopsis thaliana
AT4G09550 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6040216-6041215 Arabidopsis thaliana
AT4G09550 2.0kb upstream 2.0kb upstream 3098 true Chr4: 6037118-6040215 Arabidopsis thaliana
AT4G09550 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6037118-6039117 Arabidopsis thaliana
AT4G09550 2.0kb downstream 2.0kb downstream 3098 true Chr4: 6039118-6042215 Arabidopsis thaliana
AT4G09550 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6040216-6042215 Arabidopsis thaliana
AT4G09550 5.0kb upstream 5.0kb upstream 6098 true Chr4: 6034118-6040215 Arabidopsis thaliana
AT4G09550 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6034118-6039117 Arabidopsis thaliana
AT4G09550 5.0kb downstream 5.0kb downstream 6098 true Chr4: 6039118-6045215 Arabidopsis thaliana
AT4G09550 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6040216-6045215 Arabidopsis thaliana
AT4G09550 10.0kb upstream 10.0kb upstream 11098 true Chr4: 6029118-6040215 Arabidopsis thaliana
AT4G09550 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6029118-6039117 Arabidopsis thaliana
AT4G09550 10.0kb downstream 10.0kb downstream 11098 true Chr4: 6039118-6050215 Arabidopsis thaliana
AT4G09550 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6040216-6050215 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026782 5273 Angiosperm View MSA
122361842 5261 Brassicaceae View MSA
123838480 5264 Brassicales-Malvales View MSA
124322464 5266 SBM View MSA
124239506 5268 Malvidae View MSA
124072134 5270 Rosid View MSA
123747671 5271 Pentapetalae View MSA
122795049 5272 Eudicot View MSA
121344044 5274 Embryophyte View MSA
123425192 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.915        
cufflinks 18.364       High
cufflinks 6.579       Low
cufflinks 15.733        
cufflinks 5.893       Low
cufflinks 17.102        

0 Strain