Gene : AT4G09060 A. thaliana TAIR10
Defline:  (1 of 2) PTHR35689:SF1 - F10B6.4 Genomic Order:  722
Name:  ? AT4G09060 Secondary Identifier:  ? PAC:19645311
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09060 0.5kb upstream 0.5kb upstream 3172 true Chr4: 5797659-5800830 Arabidopsis thaliana
AT4G09060 0.5kb upstream 0.5kb upstream 500 false Chr4: 5800331-5800830 Arabidopsis thaliana
AT4G09060 0.5kb downstream 0.5kb downstream 3172 true Chr4: 5797159-5800330 Arabidopsis thaliana
AT4G09060 0.5kb downstream 0.5kb downstream 500 false Chr4: 5797159-5797658 Arabidopsis thaliana
AT4G09060 1.0kb upstream 1.0kb upstream 3672 true Chr4: 5797659-5801330 Arabidopsis thaliana
AT4G09060 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5800331-5801330 Arabidopsis thaliana
AT4G09060 1.0kb downstream 1.0kb downstream 3672 true Chr4: 5796659-5800330 Arabidopsis thaliana
AT4G09060 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5796659-5797658 Arabidopsis thaliana
AT4G09060 2.0kb upstream 2.0kb upstream 4672 true Chr4: 5797659-5802330 Arabidopsis thaliana
AT4G09060 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5800331-5802330 Arabidopsis thaliana
AT4G09060 2.0kb downstream 2.0kb downstream 4672 true Chr4: 5795659-5800330 Arabidopsis thaliana
AT4G09060 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5795659-5797658 Arabidopsis thaliana
AT4G09060 5.0kb upstream 5.0kb upstream 7672 true Chr4: 5797659-5805330 Arabidopsis thaliana
AT4G09060 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5800331-5805330 Arabidopsis thaliana
AT4G09060 5.0kb downstream 5.0kb downstream 7672 true Chr4: 5792659-5800330 Arabidopsis thaliana
AT4G09060 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5792659-5797658 Arabidopsis thaliana
AT4G09060 10.0kb upstream 10.0kb upstream 12672 true Chr4: 5797659-5810330 Arabidopsis thaliana
AT4G09060 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5800331-5810330 Arabidopsis thaliana
AT4G09060 10.0kb downstream 10.0kb downstream 12672 true Chr4: 5787659-5800330 Arabidopsis thaliana
AT4G09060 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5787659-5797658 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367553 5261 Brassicaceae View MSA
123838976 5264 Brassicales-Malvales View MSA
124344488 5266 SBM View MSA
124238731 5268 Malvidae View MSA
124061266 5270 Rosid View MSA
123741660 5271 Pentapetalae View MSA
122790535 5272 Eudicot View MSA
122047670 5273 Angiosperm View MSA
121344374 5274 Embryophyte View MSA
123380030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.531        
cufflinks 1.394        
cufflinks 0.277        
cufflinks 1.062        
cufflinks 0.215     Low Low
cufflinks 1.703       High

0 Strain