Gene : MLH1 A. thaliana TAIR10
Primary Identifier:  ? AT4G09140 Defline:  (1 of 1) K08734 - DNA mismatch repair protein MLH1 (MLH1)
Genomic Order:  730 Name:  ? AT4G09140
Secondary Identifier:  ? PAC:19648230
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09140 0.5kb upstream 0.5kb upstream 4596 true Chr4: 5816942-5821537 Arabidopsis thaliana
AT4G09140 0.5kb upstream 0.5kb upstream 500 false Chr4: 5821038-5821537 Arabidopsis thaliana
AT4G09140 0.5kb downstream 0.5kb downstream 4596 true Chr4: 5816442-5821037 Arabidopsis thaliana
AT4G09140 0.5kb downstream 0.5kb downstream 500 false Chr4: 5816442-5816941 Arabidopsis thaliana
AT4G09140 1.0kb upstream 1.0kb upstream 5096 true Chr4: 5816942-5822037 Arabidopsis thaliana
AT4G09140 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5821038-5822037 Arabidopsis thaliana
AT4G09140 1.0kb downstream 1.0kb downstream 5096 true Chr4: 5815942-5821037 Arabidopsis thaliana
AT4G09140 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5815942-5816941 Arabidopsis thaliana
AT4G09140 2.0kb upstream 2.0kb upstream 6096 true Chr4: 5816942-5823037 Arabidopsis thaliana
AT4G09140 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5821038-5823037 Arabidopsis thaliana
AT4G09140 2.0kb downstream 2.0kb downstream 6096 true Chr4: 5814942-5821037 Arabidopsis thaliana
AT4G09140 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5814942-5816941 Arabidopsis thaliana
AT4G09140 5.0kb upstream 5.0kb upstream 9096 true Chr4: 5816942-5826037 Arabidopsis thaliana
AT4G09140 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5821038-5826037 Arabidopsis thaliana
AT4G09140 5.0kb downstream 5.0kb downstream 9096 true Chr4: 5811942-5821037 Arabidopsis thaliana
AT4G09140 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5811942-5816941 Arabidopsis thaliana
AT4G09140 10.0kb upstream 10.0kb upstream 14096 true Chr4: 5816942-5831037 Arabidopsis thaliana
AT4G09140 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5821038-5831037 Arabidopsis thaliana
AT4G09140 10.0kb downstream 10.0kb downstream 14096 true Chr4: 5806942-5821037 Arabidopsis thaliana
AT4G09140 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5806942-5816941 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374886 5261 Brassicaceae View MSA
123832351 5264 Brassicales-Malvales View MSA
124340120 5266 SBM View MSA
124240486 5268 Malvidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.162        
cufflinks 6.701       High
cufflinks 3.591       Low
cufflinks 6.657       High
cufflinks 3.643       Low
cufflinks 5.729        

0 Strain