Gene : AT4G08850 A. thaliana TAIR10
Defline:  (1 of 3) KOG0472//KOG1187 - Leucine-rich repeat protein // Serine/threonine protein kinase Genomic Order:  695
Name:  ? AT4G08850 Secondary Identifier:  ? PAC:19646990
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08850 0.5kb upstream 0.5kb upstream 4648 true Chr4: 5636489-5641136 Arabidopsis thaliana
AT4G08850 0.5kb upstream 0.5kb upstream 500 false Chr4: 5640637-5641136 Arabidopsis thaliana
AT4G08850 0.5kb downstream 0.5kb downstream 4648 true Chr4: 5635989-5640636 Arabidopsis thaliana
AT4G08850 0.5kb downstream 0.5kb downstream 500 false Chr4: 5635989-5636488 Arabidopsis thaliana
AT4G08850 1.0kb upstream 1.0kb upstream 5148 true Chr4: 5636489-5641636 Arabidopsis thaliana
AT4G08850 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5640637-5641636 Arabidopsis thaliana
AT4G08850 1.0kb downstream 1.0kb downstream 5148 true Chr4: 5635489-5640636 Arabidopsis thaliana
AT4G08850 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5635489-5636488 Arabidopsis thaliana
AT4G08850 2.0kb upstream 2.0kb upstream 6148 true Chr4: 5636489-5642636 Arabidopsis thaliana
AT4G08850 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5640637-5642636 Arabidopsis thaliana
AT4G08850 2.0kb downstream 2.0kb downstream 6148 true Chr4: 5634489-5640636 Arabidopsis thaliana
AT4G08850 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5634489-5636488 Arabidopsis thaliana
AT4G08850 5.0kb upstream 5.0kb upstream 9148 true Chr4: 5636489-5645636 Arabidopsis thaliana
AT4G08850 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5640637-5645636 Arabidopsis thaliana
AT4G08850 5.0kb downstream 5.0kb downstream 9148 true Chr4: 5631489-5640636 Arabidopsis thaliana
AT4G08850 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5631489-5636488 Arabidopsis thaliana
AT4G08850 10.0kb upstream 10.0kb upstream 14148 true Chr4: 5636489-5650636 Arabidopsis thaliana
AT4G08850 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5640637-5650636 Arabidopsis thaliana
AT4G08850 10.0kb downstream 10.0kb downstream 14148 true Chr4: 5626489-5640636 Arabidopsis thaliana
AT4G08850 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5626489-5636488 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364170 5261 Brassicaceae View MSA
123841624 5264 Brassicales-Malvales View MSA
124351403 5266 SBM View MSA
124254665 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.394     High High
cufflinks 1.677       Low
cufflinks 11.24        
cufflinks 2.814        
cufflinks 16.486        
cufflinks 4.831        

0 Strain