Gene : SAH7 A. thaliana TAIR10
Primary Identifier:  ? AT4G08685 Defline:  (1 of 3) PTHR31614//PTHR31614:SF5 - FAMILY NOT NAMED // ALLERGEN-LIKE PROTEIN BRSN20-RELATED
Genomic Order:  682 Name:  ? AT4G08685
Secondary Identifier:  ? PAC:19645123
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08685 0.5kb upstream 0.5kb upstream 1442 true Chr4: 5549929-5551370 Arabidopsis thaliana
AT4G08685 0.5kb upstream 0.5kb upstream 500 false Chr4: 5549929-5550428 Arabidopsis thaliana
AT4G08685 0.5kb downstream 0.5kb downstream 1442 true Chr4: 5550429-5551870 Arabidopsis thaliana
AT4G08685 0.5kb downstream 0.5kb downstream 500 false Chr4: 5551371-5551870 Arabidopsis thaliana
AT4G08685 1.0kb upstream 1.0kb upstream 1942 true Chr4: 5549429-5551370 Arabidopsis thaliana
AT4G08685 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5549429-5550428 Arabidopsis thaliana
AT4G08685 1.0kb downstream 1.0kb downstream 1942 true Chr4: 5550429-5552370 Arabidopsis thaliana
AT4G08685 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5551371-5552370 Arabidopsis thaliana
AT4G08685 2.0kb upstream 2.0kb upstream 2942 true Chr4: 5548429-5551370 Arabidopsis thaliana
AT4G08685 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5548429-5550428 Arabidopsis thaliana
AT4G08685 2.0kb downstream 2.0kb downstream 2942 true Chr4: 5550429-5553370 Arabidopsis thaliana
AT4G08685 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5551371-5553370 Arabidopsis thaliana
AT4G08685 5.0kb upstream 5.0kb upstream 5942 true Chr4: 5545429-5551370 Arabidopsis thaliana
AT4G08685 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5545429-5550428 Arabidopsis thaliana
AT4G08685 5.0kb downstream 5.0kb downstream 5942 true Chr4: 5550429-5556370 Arabidopsis thaliana
AT4G08685 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5551371-5556370 Arabidopsis thaliana
AT4G08685 10.0kb upstream 10.0kb upstream 10942 true Chr4: 5540429-5551370 Arabidopsis thaliana
AT4G08685 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5540429-5550428 Arabidopsis thaliana
AT4G08685 10.0kb downstream 10.0kb downstream 10942 true Chr4: 5550429-5561370 Arabidopsis thaliana
AT4G08685 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5551371-5561370 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368606 5261 Brassicaceae View MSA
123837904 5264 Brassicales-Malvales View MSA
124336938 5266 SBM View MSA
124243301 5268 Malvidae View MSA
124073821 5270 Rosid View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.599     High  
cufflinks 69.739     High  
cufflinks 29.451     High  
cufflinks 63.839     High  
cufflinks 19.869       Low
cufflinks 103.404     High High

0 Strain