Gene : AT4G08300 A. thaliana TAIR10
Defline:  (1 of 50) PF00892 - EamA-like transporter family (EamA) Genomic Order:  645
Name:  ? AT4G08300 Secondary Identifier:  ? PAC:19649063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08300 0.5kb upstream 0.5kb upstream 3952 true Chr4: 5244391-5248342 Arabidopsis thaliana
AT4G08300 0.5kb upstream 0.5kb upstream 500 false Chr4: 5244391-5244890 Arabidopsis thaliana
AT4G08300 0.5kb downstream 0.5kb downstream 3952 true Chr4: 5244891-5248842 Arabidopsis thaliana
AT4G08300 0.5kb downstream 0.5kb downstream 500 false Chr4: 5248343-5248842 Arabidopsis thaliana
AT4G08300 1.0kb upstream 1.0kb upstream 4452 true Chr4: 5243891-5248342 Arabidopsis thaliana
AT4G08300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5243891-5244890 Arabidopsis thaliana
AT4G08300 1.0kb downstream 1.0kb downstream 4452 true Chr4: 5244891-5249342 Arabidopsis thaliana
AT4G08300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5248343-5249342 Arabidopsis thaliana
AT4G08300 2.0kb upstream 2.0kb upstream 5452 true Chr4: 5242891-5248342 Arabidopsis thaliana
AT4G08300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5242891-5244890 Arabidopsis thaliana
AT4G08300 2.0kb downstream 2.0kb downstream 5452 true Chr4: 5244891-5250342 Arabidopsis thaliana
AT4G08300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5248343-5250342 Arabidopsis thaliana
AT4G08300 5.0kb upstream 5.0kb upstream 8452 true Chr4: 5239891-5248342 Arabidopsis thaliana
AT4G08300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5239891-5244890 Arabidopsis thaliana
AT4G08300 5.0kb downstream 5.0kb downstream 8452 true Chr4: 5244891-5253342 Arabidopsis thaliana
AT4G08300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5248343-5253342 Arabidopsis thaliana
AT4G08300 10.0kb upstream 10.0kb upstream 13452 true Chr4: 5234891-5248342 Arabidopsis thaliana
AT4G08300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5234891-5244890 Arabidopsis thaliana
AT4G08300 10.0kb downstream 10.0kb downstream 13452 true Chr4: 5244891-5258342 Arabidopsis thaliana
AT4G08300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5248343-5258342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361776 5261 Brassicaceae View MSA
123839059 5264 Brassicales-Malvales View MSA
124342021 5266 SBM View MSA
124253856 5268 Malvidae View MSA
124065362 5270 Rosid View MSA
123750992 5271 Pentapetalae View MSA
122796473 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.209        
cufflinks 9.732        
cufflinks 0.332       Low
cufflinks 17.368       High
cufflinks 0.53        
cufflinks 1.138        

0 Strain