Gene : AT4G12050 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  1036
Name:  ? AT4G12050 Secondary Identifier:  ? PAC:19645094
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12050 0.5kb upstream 0.5kb upstream 2005 true Chr4: 7219824-7221828 Arabidopsis thaliana
AT4G12050 0.5kb upstream 0.5kb upstream 500 false Chr4: 7221329-7221828 Arabidopsis thaliana
AT4G12050 0.5kb downstream 0.5kb downstream 2005 true Chr4: 7219324-7221328 Arabidopsis thaliana
AT4G12050 0.5kb downstream 0.5kb downstream 500 false Chr4: 7219324-7219823 Arabidopsis thaliana
AT4G12050 1.0kb upstream 1.0kb upstream 2505 true Chr4: 7219824-7222328 Arabidopsis thaliana
AT4G12050 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7221329-7222328 Arabidopsis thaliana
AT4G12050 1.0kb downstream 1.0kb downstream 2505 true Chr4: 7218824-7221328 Arabidopsis thaliana
AT4G12050 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7218824-7219823 Arabidopsis thaliana
AT4G12050 2.0kb upstream 2.0kb upstream 3505 true Chr4: 7219824-7223328 Arabidopsis thaliana
AT4G12050 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7221329-7223328 Arabidopsis thaliana
AT4G12050 2.0kb downstream 2.0kb downstream 3505 true Chr4: 7217824-7221328 Arabidopsis thaliana
AT4G12050 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7217824-7219823 Arabidopsis thaliana
AT4G12050 5.0kb upstream 5.0kb upstream 6505 true Chr4: 7219824-7226328 Arabidopsis thaliana
AT4G12050 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7221329-7226328 Arabidopsis thaliana
AT4G12050 5.0kb downstream 5.0kb downstream 6505 true Chr4: 7214824-7221328 Arabidopsis thaliana
AT4G12050 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7214824-7219823 Arabidopsis thaliana
AT4G12050 10.0kb upstream 10.0kb upstream 11505 true Chr4: 7219824-7231328 Arabidopsis thaliana
AT4G12050 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7221329-7231328 Arabidopsis thaliana
AT4G12050 10.0kb downstream 10.0kb downstream 11505 true Chr4: 7209824-7221328 Arabidopsis thaliana
AT4G12050 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7209824-7219823 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376824 5261 Brassicaceae View MSA
123837037 5264 Brassicales-Malvales View MSA
124344356 5266 SBM View MSA
124246711 5268 Malvidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.094     Low  
cufflinks 5.75        
cufflinks 0.088     Low  
cufflinks 10.675       High
cufflinks 0.079     Low  
cufflinks 6.547        

0 Strain