Gene : AT4G11911 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  1021
Name:  ? AT4G11911 Secondary Identifier:  ? PAC:19647929
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11911 0.5kb upstream 0.5kb upstream 1791 true Chr4: 7157650-7159440 Arabidopsis thaliana
AT4G11911 0.5kb upstream 0.5kb upstream 500 false Chr4: 7157650-7158149 Arabidopsis thaliana
AT4G11911 0.5kb downstream 0.5kb downstream 1791 true Chr4: 7158150-7159940 Arabidopsis thaliana
AT4G11911 0.5kb downstream 0.5kb downstream 500 false Chr4: 7159441-7159940 Arabidopsis thaliana
AT4G11911 1.0kb upstream 1.0kb upstream 2291 true Chr4: 7157150-7159440 Arabidopsis thaliana
AT4G11911 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7157150-7158149 Arabidopsis thaliana
AT4G11911 1.0kb downstream 1.0kb downstream 2291 true Chr4: 7158150-7160440 Arabidopsis thaliana
AT4G11911 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7159441-7160440 Arabidopsis thaliana
AT4G11911 2.0kb upstream 2.0kb upstream 3291 true Chr4: 7156150-7159440 Arabidopsis thaliana
AT4G11911 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7156150-7158149 Arabidopsis thaliana
AT4G11911 2.0kb downstream 2.0kb downstream 3291 true Chr4: 7158150-7161440 Arabidopsis thaliana
AT4G11911 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7159441-7161440 Arabidopsis thaliana
AT4G11911 5.0kb upstream 5.0kb upstream 6291 true Chr4: 7153150-7159440 Arabidopsis thaliana
AT4G11911 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7153150-7158149 Arabidopsis thaliana
AT4G11911 5.0kb downstream 5.0kb downstream 6291 true Chr4: 7158150-7164440 Arabidopsis thaliana
AT4G11911 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7159441-7164440 Arabidopsis thaliana
AT4G11911 10.0kb upstream 10.0kb upstream 11291 true Chr4: 7148150-7159440 Arabidopsis thaliana
AT4G11911 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7148150-7158149 Arabidopsis thaliana
AT4G11911 10.0kb downstream 10.0kb downstream 11291 true Chr4: 7158150-7169440 Arabidopsis thaliana
AT4G11911 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7159441-7169440 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377358 5261 Brassicaceae View MSA
123801509 5264 Brassicales-Malvales View MSA
124298804 5266 SBM View MSA
124150366 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.453        
cufflinks 0.256     Low  
cufflinks 2.955       High
cufflinks 0.512        
cufflinks 2.672        
cufflinks 0.096     Low Low

0 Strain