Gene : AT4G11990 A. thaliana TAIR10
Defline:  (1 of 4) PTHR14326//PTHR14326:SF15 - TARGETING PROTEIN FOR XKLP2 // CELL CYCLE REGULATED MICROTUBULE ASSOCIATED PROTEIN Genomic Order:  1029
Name:  ? AT4G11990 Secondary Identifier:  ? PAC:19645894
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11990 0.5kb upstream 0.5kb upstream 4280 true Chr4: 7186096-7190375 Arabidopsis thaliana
AT4G11990 0.5kb upstream 0.5kb upstream 500 false Chr4: 7189876-7190375 Arabidopsis thaliana
AT4G11990 0.5kb downstream 0.5kb downstream 4280 true Chr4: 7185596-7189875 Arabidopsis thaliana
AT4G11990 0.5kb downstream 0.5kb downstream 500 false Chr4: 7185596-7186095 Arabidopsis thaliana
AT4G11990 1.0kb upstream 1.0kb upstream 4780 true Chr4: 7186096-7190875 Arabidopsis thaliana
AT4G11990 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7189876-7190875 Arabidopsis thaliana
AT4G11990 1.0kb downstream 1.0kb downstream 4780 true Chr4: 7185096-7189875 Arabidopsis thaliana
AT4G11990 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7185096-7186095 Arabidopsis thaliana
AT4G11990 2.0kb upstream 2.0kb upstream 5780 true Chr4: 7186096-7191875 Arabidopsis thaliana
AT4G11990 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7189876-7191875 Arabidopsis thaliana
AT4G11990 2.0kb downstream 2.0kb downstream 5780 true Chr4: 7184096-7189875 Arabidopsis thaliana
AT4G11990 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7184096-7186095 Arabidopsis thaliana
AT4G11990 5.0kb upstream 5.0kb upstream 8780 true Chr4: 7186096-7194875 Arabidopsis thaliana
AT4G11990 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7189876-7194875 Arabidopsis thaliana
AT4G11990 5.0kb downstream 5.0kb downstream 8780 true Chr4: 7181096-7189875 Arabidopsis thaliana
AT4G11990 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7181096-7186095 Arabidopsis thaliana
AT4G11990 10.0kb upstream 10.0kb upstream 13780 true Chr4: 7186096-7199875 Arabidopsis thaliana
AT4G11990 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7189876-7199875 Arabidopsis thaliana
AT4G11990 10.0kb downstream 10.0kb downstream 13780 true Chr4: 7176096-7189875 Arabidopsis thaliana
AT4G11990 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7176096-7186095 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374974 5261 Brassicaceae View MSA
123837981 5264 Brassicales-Malvales View MSA
124346219 5266 SBM View MSA
124249756 5268 Malvidae View MSA
124069162 5270 Rosid View MSA
123753676 5271 Pentapetalae View MSA
122788665 5272 Eudicot View MSA
122042208 5273 Angiosperm View MSA
121309934 5274 Embryophyte View MSA
123347563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.339        
cufflinks 1.825        
cufflinks 0.364        
cufflinks 1.344        
cufflinks 0.345        
cufflinks 2.011       High

0 Strain