Gene : PLDGAMMA1 A. thaliana TAIR10
Primary Identifier:  ? AT4G11850 Defline:  (1 of 5) PTHR18896//PTHR18896:SF65 - PHOSPHOLIPASE D // PHOSPHOLIPASE D BETA 1-RELATED
Genomic Order:  1013 Name:  ? AT4G11850
Secondary Identifier:  ? PAC:19647582
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPASYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3561 Arabidopsis thaliana pathologic  
Athaliana PWY-7039 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11850 0.5kb upstream 0.5kb upstream 4578 true Chr4: 7129123-7133700 Arabidopsis thaliana
AT4G11850 0.5kb upstream 0.5kb upstream 500 false Chr4: 7133201-7133700 Arabidopsis thaliana
AT4G11850 0.5kb downstream 0.5kb downstream 4578 true Chr4: 7128623-7133200 Arabidopsis thaliana
AT4G11850 0.5kb downstream 0.5kb downstream 500 false Chr4: 7128623-7129122 Arabidopsis thaliana
AT4G11850 1.0kb upstream 1.0kb upstream 5078 true Chr4: 7129123-7134200 Arabidopsis thaliana
AT4G11850 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7133201-7134200 Arabidopsis thaliana
AT4G11850 1.0kb downstream 1.0kb downstream 5078 true Chr4: 7128123-7133200 Arabidopsis thaliana
AT4G11850 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7128123-7129122 Arabidopsis thaliana
AT4G11850 2.0kb upstream 2.0kb upstream 6078 true Chr4: 7129123-7135200 Arabidopsis thaliana
AT4G11850 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7133201-7135200 Arabidopsis thaliana
AT4G11850 2.0kb downstream 2.0kb downstream 6078 true Chr4: 7127123-7133200 Arabidopsis thaliana
AT4G11850 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7127123-7129122 Arabidopsis thaliana
AT4G11850 5.0kb upstream 5.0kb upstream 9078 true Chr4: 7129123-7138200 Arabidopsis thaliana
AT4G11850 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7133201-7138200 Arabidopsis thaliana
AT4G11850 5.0kb downstream 5.0kb downstream 9078 true Chr4: 7124123-7133200 Arabidopsis thaliana
AT4G11850 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7124123-7129122 Arabidopsis thaliana
AT4G11850 10.0kb upstream 10.0kb upstream 14078 true Chr4: 7129123-7143200 Arabidopsis thaliana
AT4G11850 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7133201-7143200 Arabidopsis thaliana
AT4G11850 10.0kb downstream 10.0kb downstream 14078 true Chr4: 7119123-7133200 Arabidopsis thaliana
AT4G11850 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7119123-7129122 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374010 5261 Brassicaceae View MSA
123838904 5264 Brassicales-Malvales View MSA
124342671 5266 SBM View MSA
124247063 5268 Malvidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.973     High High
cufflinks 18.546        
cufflinks 10.554       Low
cufflinks 22.227        
cufflinks 18.215        
cufflinks 22.664        

0 Strain