Gene : AT4G11910 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  1020
Name:  ? AT4G11910 Secondary Identifier:  ? PAC:19648549
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11910 0.5kb upstream 0.5kb upstream 2291 true Chr4: 7155752-7158042 Arabidopsis thaliana
AT4G11910 0.5kb upstream 0.5kb upstream 500 false Chr4: 7155752-7156251 Arabidopsis thaliana
AT4G11910 0.5kb downstream 0.5kb downstream 2291 true Chr4: 7156252-7158542 Arabidopsis thaliana
AT4G11910 0.5kb downstream 0.5kb downstream 500 false Chr4: 7158043-7158542 Arabidopsis thaliana
AT4G11910 1.0kb upstream 1.0kb upstream 2791 true Chr4: 7155252-7158042 Arabidopsis thaliana
AT4G11910 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7155252-7156251 Arabidopsis thaliana
AT4G11910 1.0kb downstream 1.0kb downstream 2791 true Chr4: 7156252-7159042 Arabidopsis thaliana
AT4G11910 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7158043-7159042 Arabidopsis thaliana
AT4G11910 2.0kb upstream 2.0kb upstream 3791 true Chr4: 7154252-7158042 Arabidopsis thaliana
AT4G11910 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7154252-7156251 Arabidopsis thaliana
AT4G11910 2.0kb downstream 2.0kb downstream 3791 true Chr4: 7156252-7160042 Arabidopsis thaliana
AT4G11910 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7158043-7160042 Arabidopsis thaliana
AT4G11910 5.0kb upstream 5.0kb upstream 6791 true Chr4: 7151252-7158042 Arabidopsis thaliana
AT4G11910 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7151252-7156251 Arabidopsis thaliana
AT4G11910 5.0kb downstream 5.0kb downstream 6791 true Chr4: 7156252-7163042 Arabidopsis thaliana
AT4G11910 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7158043-7163042 Arabidopsis thaliana
AT4G11910 10.0kb upstream 10.0kb upstream 11791 true Chr4: 7146252-7158042 Arabidopsis thaliana
AT4G11910 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7146252-7156251 Arabidopsis thaliana
AT4G11910 10.0kb downstream 10.0kb downstream 11791 true Chr4: 7156252-7168042 Arabidopsis thaliana
AT4G11910 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7158043-7168042 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360736 5261 Brassicaceae View MSA
123838568 5264 Brassicales-Malvales View MSA
124341022 5266 SBM View MSA
124253223 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28        
cufflinks 2.008        
cufflinks 1.7       Low
cufflinks 2.612        
cufflinks 3.947       High
cufflinks 1.893        

0 Strain