Gene : AT4G11780 A. thaliana TAIR10
Genomic Order:  1005 Name:  ? AT4G11780
Secondary Identifier:  ? PAC:19644914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11780 0.5kb upstream 0.5kb upstream 2743 true Chr4: 7085470-7088212 Arabidopsis thaliana
AT4G11780 0.5kb upstream 0.5kb upstream 500 false Chr4: 7085470-7085969 Arabidopsis thaliana
AT4G11780 0.5kb downstream 0.5kb downstream 2743 true Chr4: 7085970-7088712 Arabidopsis thaliana
AT4G11780 0.5kb downstream 0.5kb downstream 500 false Chr4: 7088213-7088712 Arabidopsis thaliana
AT4G11780 1.0kb upstream 1.0kb upstream 3243 true Chr4: 7084970-7088212 Arabidopsis thaliana
AT4G11780 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7084970-7085969 Arabidopsis thaliana
AT4G11780 1.0kb downstream 1.0kb downstream 3243 true Chr4: 7085970-7089212 Arabidopsis thaliana
AT4G11780 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7088213-7089212 Arabidopsis thaliana
AT4G11780 2.0kb upstream 2.0kb upstream 4243 true Chr4: 7083970-7088212 Arabidopsis thaliana
AT4G11780 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7083970-7085969 Arabidopsis thaliana
AT4G11780 2.0kb downstream 2.0kb downstream 4243 true Chr4: 7085970-7090212 Arabidopsis thaliana
AT4G11780 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7088213-7090212 Arabidopsis thaliana
AT4G11780 5.0kb upstream 5.0kb upstream 7243 true Chr4: 7080970-7088212 Arabidopsis thaliana
AT4G11780 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7080970-7085969 Arabidopsis thaliana
AT4G11780 5.0kb downstream 5.0kb downstream 7243 true Chr4: 7085970-7093212 Arabidopsis thaliana
AT4G11780 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7088213-7093212 Arabidopsis thaliana
AT4G11780 10.0kb upstream 10.0kb upstream 12243 true Chr4: 7075970-7088212 Arabidopsis thaliana
AT4G11780 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7075970-7085969 Arabidopsis thaliana
AT4G11780 10.0kb downstream 10.0kb downstream 12243 true Chr4: 7085970-7098212 Arabidopsis thaliana
AT4G11780 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7088213-7098212 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378681 5261 Brassicaceae View MSA
123837240 5264 Brassicales-Malvales View MSA
124322267 5266 SBM View MSA
124239488 5268 Malvidae View MSA
124073974 5270 Rosid View MSA
123741282 5271 Pentapetalae View MSA
122788911 5272 Eudicot View MSA
122048272 5273 Angiosperm View MSA
121310912 5274 Embryophyte View MSA
123348286 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.756        
cufflinks 0.029     Low  
cufflinks 1.6        
cufflinks 0.012     Low Low
cufflinks 3.562       High

0 Strain