Gene : AT-HSFB2B A. thaliana TAIR10
Primary Identifier:  ? AT4G11660 Defline:  (1 of 1) PTHR10015//PTHR10015:SF169 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-2B
Genomic Order:  993 Name:  ? AT4G11660
Secondary Identifier:  ? PAC:19646432
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11660 0.5kb upstream 0.5kb upstream 2579 true Chr4: 7042130-7044708 Arabidopsis thaliana
AT4G11660 0.5kb upstream 0.5kb upstream 500 false Chr4: 7042130-7042629 Arabidopsis thaliana
AT4G11660 0.5kb downstream 0.5kb downstream 2579 true Chr4: 7042630-7045208 Arabidopsis thaliana
AT4G11660 0.5kb downstream 0.5kb downstream 500 false Chr4: 7044709-7045208 Arabidopsis thaliana
AT4G11660 1.0kb upstream 1.0kb upstream 3079 true Chr4: 7041630-7044708 Arabidopsis thaliana
AT4G11660 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7041630-7042629 Arabidopsis thaliana
AT4G11660 1.0kb downstream 1.0kb downstream 3079 true Chr4: 7042630-7045708 Arabidopsis thaliana
AT4G11660 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7044709-7045708 Arabidopsis thaliana
AT4G11660 2.0kb upstream 2.0kb upstream 4079 true Chr4: 7040630-7044708 Arabidopsis thaliana
AT4G11660 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7040630-7042629 Arabidopsis thaliana
AT4G11660 2.0kb downstream 2.0kb downstream 4079 true Chr4: 7042630-7046708 Arabidopsis thaliana
AT4G11660 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7044709-7046708 Arabidopsis thaliana
AT4G11660 5.0kb upstream 5.0kb upstream 7079 true Chr4: 7037630-7044708 Arabidopsis thaliana
AT4G11660 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7037630-7042629 Arabidopsis thaliana
AT4G11660 5.0kb downstream 5.0kb downstream 7079 true Chr4: 7042630-7049708 Arabidopsis thaliana
AT4G11660 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7044709-7049708 Arabidopsis thaliana
AT4G11660 10.0kb upstream 10.0kb upstream 12079 true Chr4: 7032630-7044708 Arabidopsis thaliana
AT4G11660 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7032630-7042629 Arabidopsis thaliana
AT4G11660 10.0kb downstream 10.0kb downstream 12079 true Chr4: 7042630-7054708 Arabidopsis thaliana
AT4G11660 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7044709-7054708 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373232 5261 Brassicaceae View MSA
123832596 5264 Brassicales-Malvales View MSA
124342086 5266 SBM View MSA
124242310 5268 Malvidae View MSA
124066248 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.998        
cufflinks 17.046        
cufflinks 7.054       Low
cufflinks 17.909        
cufflinks 6.69       Low
cufflinks 16.872        

0 Strain