Gene : AT4G11380 A. thaliana TAIR10
Defline:  (1 of 2) K12392 - AP-1 complex subunit beta-1 (AP1B1) Genomic Order:  962
Name:  ? AT4G11380 Secondary Identifier:  ? PAC:19648063
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11380 0.5kb upstream 0.5kb upstream 5981 true Chr4: 6919989-6925969 Arabidopsis thaliana
AT4G11380 0.5kb upstream 0.5kb upstream 500 false Chr4: 6919989-6920488 Arabidopsis thaliana
AT4G11380 0.5kb downstream 0.5kb downstream 5981 true Chr4: 6920489-6926469 Arabidopsis thaliana
AT4G11380 0.5kb downstream 0.5kb downstream 500 false Chr4: 6925970-6926469 Arabidopsis thaliana
AT4G11380 1.0kb upstream 1.0kb upstream 6481 true Chr4: 6919489-6925969 Arabidopsis thaliana
AT4G11380 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6919489-6920488 Arabidopsis thaliana
AT4G11380 1.0kb downstream 1.0kb downstream 6481 true Chr4: 6920489-6926969 Arabidopsis thaliana
AT4G11380 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6925970-6926969 Arabidopsis thaliana
AT4G11380 2.0kb upstream 2.0kb upstream 7481 true Chr4: 6918489-6925969 Arabidopsis thaliana
AT4G11380 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6918489-6920488 Arabidopsis thaliana
AT4G11380 2.0kb downstream 2.0kb downstream 7481 true Chr4: 6920489-6927969 Arabidopsis thaliana
AT4G11380 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6925970-6927969 Arabidopsis thaliana
AT4G11380 5.0kb upstream 5.0kb upstream 10481 true Chr4: 6915489-6925969 Arabidopsis thaliana
AT4G11380 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6915489-6920488 Arabidopsis thaliana
AT4G11380 5.0kb downstream 5.0kb downstream 10481 true Chr4: 6920489-6930969 Arabidopsis thaliana
AT4G11380 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6925970-6930969 Arabidopsis thaliana
AT4G11380 10.0kb upstream 10.0kb upstream 15481 true Chr4: 6910489-6925969 Arabidopsis thaliana
AT4G11380 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6910489-6920488 Arabidopsis thaliana
AT4G11380 10.0kb downstream 10.0kb downstream 15481 true Chr4: 6920489-6935969 Arabidopsis thaliana
AT4G11380 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6925970-6935969 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368721 5261 Brassicaceae View MSA
123836878 5264 Brassicales-Malvales View MSA
124343500 5266 SBM View MSA
124254601 5268 Malvidae View MSA
124062772 5270 Rosid View MSA
123744505 5271 Pentapetalae View MSA
122790375 5272 Eudicot View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.832        
cufflinks 8.587        
cufflinks 7.048       Low
cufflinks 9.915        
cufflinks 7.278        
cufflinks 11.923       High

0 Strain