Gene : AT4G11400 A. thaliana TAIR10
Defline:  (1 of 10) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  966
Name:  ? AT4G11400 Secondary Identifier:  ? PAC:19647128
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11400 0.5kb upstream 0.5kb upstream 2323 true Chr4: 6938217-6940539 Arabidopsis thaliana
AT4G11400 0.5kb upstream 0.5kb upstream 500 false Chr4: 6938217-6938716 Arabidopsis thaliana
AT4G11400 0.5kb downstream 0.5kb downstream 2323 true Chr4: 6938717-6941039 Arabidopsis thaliana
AT4G11400 0.5kb downstream 0.5kb downstream 500 false Chr4: 6940540-6941039 Arabidopsis thaliana
AT4G11400 1.0kb upstream 1.0kb upstream 2823 true Chr4: 6937717-6940539 Arabidopsis thaliana
AT4G11400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6937717-6938716 Arabidopsis thaliana
AT4G11400 1.0kb downstream 1.0kb downstream 2823 true Chr4: 6938717-6941539 Arabidopsis thaliana
AT4G11400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6940540-6941539 Arabidopsis thaliana
AT4G11400 2.0kb upstream 2.0kb upstream 3823 true Chr4: 6936717-6940539 Arabidopsis thaliana
AT4G11400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6936717-6938716 Arabidopsis thaliana
AT4G11400 2.0kb downstream 2.0kb downstream 3823 true Chr4: 6938717-6942539 Arabidopsis thaliana
AT4G11400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6940540-6942539 Arabidopsis thaliana
AT4G11400 5.0kb upstream 5.0kb upstream 6823 true Chr4: 6933717-6940539 Arabidopsis thaliana
AT4G11400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6933717-6938716 Arabidopsis thaliana
AT4G11400 5.0kb downstream 5.0kb downstream 6823 true Chr4: 6938717-6945539 Arabidopsis thaliana
AT4G11400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6940540-6945539 Arabidopsis thaliana
AT4G11400 10.0kb upstream 10.0kb upstream 11823 true Chr4: 6928717-6940539 Arabidopsis thaliana
AT4G11400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6928717-6938716 Arabidopsis thaliana
AT4G11400 10.0kb downstream 10.0kb downstream 11823 true Chr4: 6938717-6950539 Arabidopsis thaliana
AT4G11400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6940540-6950539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367161 5261 Brassicaceae View MSA
123829701 5264 Brassicales-Malvales View MSA
124337677 5266 SBM View MSA
124241936 5268 Malvidae View MSA
124068445 5270 Rosid View MSA
123753441 5271 Pentapetalae View MSA
122795804 5272 Eudicot View MSA
122049441 5273 Angiosperm View MSA
121348389 5274 Embryophyte View MSA
123380842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.561        
cufflinks 0.938        
cufflinks 0.444        
cufflinks 1.127        
cufflinks 0.266       Low
cufflinks 1.428       High

0 Strain