Gene : BTI2 A. thaliana TAIR10
Primary Identifier:  ? AT4G11220 Defline:  (1 of 1) PTHR10994//PTHR10994:SF78 - RETICULON // RETICULON-LIKE PROTEIN B1-RELATED
Genomic Order:  946 Name:  ? AT4G11220
Secondary Identifier:  ? PAC:19644084
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11220 0.5kb upstream 0.5kb upstream 2385 true Chr4: 6837911-6840295 Arabidopsis thaliana
AT4G11220 0.5kb upstream 0.5kb upstream 500 false Chr4: 6839796-6840295 Arabidopsis thaliana
AT4G11220 0.5kb downstream 0.5kb downstream 2385 true Chr4: 6837411-6839795 Arabidopsis thaliana
AT4G11220 0.5kb downstream 0.5kb downstream 500 false Chr4: 6837411-6837910 Arabidopsis thaliana
AT4G11220 1.0kb upstream 1.0kb upstream 2885 true Chr4: 6837911-6840795 Arabidopsis thaliana
AT4G11220 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6839796-6840795 Arabidopsis thaliana
AT4G11220 1.0kb downstream 1.0kb downstream 2885 true Chr4: 6836911-6839795 Arabidopsis thaliana
AT4G11220 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6836911-6837910 Arabidopsis thaliana
AT4G11220 2.0kb upstream 2.0kb upstream 3885 true Chr4: 6837911-6841795 Arabidopsis thaliana
AT4G11220 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6839796-6841795 Arabidopsis thaliana
AT4G11220 2.0kb downstream 2.0kb downstream 3885 true Chr4: 6835911-6839795 Arabidopsis thaliana
AT4G11220 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6835911-6837910 Arabidopsis thaliana
AT4G11220 5.0kb upstream 5.0kb upstream 6885 true Chr4: 6837911-6844795 Arabidopsis thaliana
AT4G11220 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6839796-6844795 Arabidopsis thaliana
AT4G11220 5.0kb downstream 5.0kb downstream 6885 true Chr4: 6832911-6839795 Arabidopsis thaliana
AT4G11220 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6832911-6837910 Arabidopsis thaliana
AT4G11220 10.0kb upstream 10.0kb upstream 11885 true Chr4: 6837911-6849795 Arabidopsis thaliana
AT4G11220 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6839796-6849795 Arabidopsis thaliana
AT4G11220 10.0kb downstream 10.0kb downstream 11885 true Chr4: 6827911-6839795 Arabidopsis thaliana
AT4G11220 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6827911-6837910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368611 5261 Brassicaceae View MSA
123837216 5264 Brassicales-Malvales View MSA
124349804 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.414        
cufflinks 42.062     High  
cufflinks 22.316       Low
cufflinks 57.216     High High
cufflinks 25.338        
cufflinks 44.696     High  

0 Strain