Gene : SGT1B A. thaliana TAIR10
Primary Identifier:  ? AT4G11260 Defline:  (1 of 2) K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1)
Genomic Order:  950 Name:  ? AT4G11260
Secondary Identifier:  ? PAC:19644200
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0 Pathways

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11260 0.5kb upstream 0.5kb upstream 3084 true Chr4: 6851277-6854360 Arabidopsis thaliana
AT4G11260 0.5kb upstream 0.5kb upstream 500 false Chr4: 6853861-6854360 Arabidopsis thaliana
AT4G11260 0.5kb downstream 0.5kb downstream 3084 true Chr4: 6850777-6853860 Arabidopsis thaliana
AT4G11260 0.5kb downstream 0.5kb downstream 500 false Chr4: 6850777-6851276 Arabidopsis thaliana
AT4G11260 1.0kb upstream 1.0kb upstream 3584 true Chr4: 6851277-6854860 Arabidopsis thaliana
AT4G11260 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6853861-6854860 Arabidopsis thaliana
AT4G11260 1.0kb downstream 1.0kb downstream 3584 true Chr4: 6850277-6853860 Arabidopsis thaliana
AT4G11260 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6850277-6851276 Arabidopsis thaliana
AT4G11260 2.0kb upstream 2.0kb upstream 4584 true Chr4: 6851277-6855860 Arabidopsis thaliana
AT4G11260 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6853861-6855860 Arabidopsis thaliana
AT4G11260 2.0kb downstream 2.0kb downstream 4584 true Chr4: 6849277-6853860 Arabidopsis thaliana
AT4G11260 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6849277-6851276 Arabidopsis thaliana
AT4G11260 5.0kb upstream 5.0kb upstream 7584 true Chr4: 6851277-6858860 Arabidopsis thaliana
AT4G11260 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6853861-6858860 Arabidopsis thaliana
AT4G11260 5.0kb downstream 5.0kb downstream 7584 true Chr4: 6846277-6853860 Arabidopsis thaliana
AT4G11260 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6846277-6851276 Arabidopsis thaliana
AT4G11260 10.0kb upstream 10.0kb upstream 12584 true Chr4: 6851277-6863860 Arabidopsis thaliana
AT4G11260 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6853861-6863860 Arabidopsis thaliana
AT4G11260 10.0kb downstream 10.0kb downstream 12584 true Chr4: 6841277-6853860 Arabidopsis thaliana
AT4G11260 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6841277-6851276 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378221 5261 Brassicaceae View MSA
123840257 5264 Brassicales-Malvales View MSA
124343696 5266 SBM View MSA
124244343 5268 Malvidae View MSA
124060578 5270 Rosid View MSA
123738666 5271 Pentapetalae View MSA
122791362 5272 Eudicot View MSA
122047508 5273 Angiosperm View MSA
121345317 5274 Embryophyte View MSA
123426836 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.651     High High
cufflinks 48.656     High Low
cufflinks 55.566     High  
cufflinks 52.667     High  
cufflinks 60.907     High  
cufflinks 50.722     High  

0 Strain