Gene : AT4G11290 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31235:SF39 - PEROXIDASE 3-RELATED Genomic Order:  953
Name:  ? AT4G11290 Secondary Identifier:  ? PAC:19648416
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11290 0.5kb upstream 0.5kb upstream 2209 true Chr4: 6869453-6871661 Arabidopsis thaliana
AT4G11290 0.5kb upstream 0.5kb upstream 500 false Chr4: 6869453-6869952 Arabidopsis thaliana
AT4G11290 0.5kb downstream 0.5kb downstream 2209 true Chr4: 6869953-6872161 Arabidopsis thaliana
AT4G11290 0.5kb downstream 0.5kb downstream 500 false Chr4: 6871662-6872161 Arabidopsis thaliana
AT4G11290 1.0kb upstream 1.0kb upstream 2709 true Chr4: 6868953-6871661 Arabidopsis thaliana
AT4G11290 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6868953-6869952 Arabidopsis thaliana
AT4G11290 1.0kb downstream 1.0kb downstream 2709 true Chr4: 6869953-6872661 Arabidopsis thaliana
AT4G11290 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6871662-6872661 Arabidopsis thaliana
AT4G11290 2.0kb upstream 2.0kb upstream 3709 true Chr4: 6867953-6871661 Arabidopsis thaliana
AT4G11290 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6867953-6869952 Arabidopsis thaliana
AT4G11290 2.0kb downstream 2.0kb downstream 3709 true Chr4: 6869953-6873661 Arabidopsis thaliana
AT4G11290 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6871662-6873661 Arabidopsis thaliana
AT4G11290 5.0kb upstream 5.0kb upstream 6709 true Chr4: 6864953-6871661 Arabidopsis thaliana
AT4G11290 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6864953-6869952 Arabidopsis thaliana
AT4G11290 5.0kb downstream 5.0kb downstream 6709 true Chr4: 6869953-6876661 Arabidopsis thaliana
AT4G11290 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6871662-6876661 Arabidopsis thaliana
AT4G11290 10.0kb upstream 10.0kb upstream 11709 true Chr4: 6859953-6871661 Arabidopsis thaliana
AT4G11290 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6859953-6869952 Arabidopsis thaliana
AT4G11290 10.0kb downstream 10.0kb downstream 11709 true Chr4: 6869953-6881661 Arabidopsis thaliana
AT4G11290 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6871662-6881661 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367310 5261 Brassicaceae View MSA
123838755 5264 Brassicales-Malvales View MSA
124341557 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.283        
cufflinks 6.27        
cufflinks 2.989        
cufflinks 8.029        
cufflinks 2.932        
cufflinks 12.935       High

0 Strain