Gene : MTSSB A. thaliana TAIR10
Primary Identifier:  ? AT4G11060 Defline:  (1 of 1) PTHR10302//PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN // SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL
Genomic Order:  929 Name:  ? AT4G11060
Secondary Identifier:  ? PAC:19647708
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11060 0.5kb upstream 0.5kb upstream 2446 true Chr4: 6754587-6757032 Arabidopsis thaliana
AT4G11060 0.5kb upstream 0.5kb upstream 500 false Chr4: 6756533-6757032 Arabidopsis thaliana
AT4G11060 0.5kb downstream 0.5kb downstream 2446 true Chr4: 6754087-6756532 Arabidopsis thaliana
AT4G11060 0.5kb downstream 0.5kb downstream 500 false Chr4: 6754087-6754586 Arabidopsis thaliana
AT4G11060 1.0kb upstream 1.0kb upstream 2946 true Chr4: 6754587-6757532 Arabidopsis thaliana
AT4G11060 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6756533-6757532 Arabidopsis thaliana
AT4G11060 1.0kb downstream 1.0kb downstream 2946 true Chr4: 6753587-6756532 Arabidopsis thaliana
AT4G11060 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6753587-6754586 Arabidopsis thaliana
AT4G11060 2.0kb upstream 2.0kb upstream 3946 true Chr4: 6754587-6758532 Arabidopsis thaliana
AT4G11060 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6756533-6758532 Arabidopsis thaliana
AT4G11060 2.0kb downstream 2.0kb downstream 3946 true Chr4: 6752587-6756532 Arabidopsis thaliana
AT4G11060 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6752587-6754586 Arabidopsis thaliana
AT4G11060 5.0kb upstream 5.0kb upstream 6946 true Chr4: 6754587-6761532 Arabidopsis thaliana
AT4G11060 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6756533-6761532 Arabidopsis thaliana
AT4G11060 5.0kb downstream 5.0kb downstream 6946 true Chr4: 6749587-6756532 Arabidopsis thaliana
AT4G11060 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6749587-6754586 Arabidopsis thaliana
AT4G11060 10.0kb upstream 10.0kb upstream 11946 true Chr4: 6754587-6766532 Arabidopsis thaliana
AT4G11060 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6756533-6766532 Arabidopsis thaliana
AT4G11060 10.0kb downstream 10.0kb downstream 11946 true Chr4: 6744587-6756532 Arabidopsis thaliana
AT4G11060 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6744587-6754586 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375092 5261 Brassicaceae View MSA
123831339 5264 Brassicales-Malvales View MSA
124344258 5266 SBM View MSA
124241151 5268 Malvidae View MSA
124067311 5270 Rosid View MSA
123743137 5271 Pentapetalae View MSA
122790596 5272 Eudicot View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.276        
cufflinks 7.297        
cufflinks 4.837        
cufflinks 8.081       High
cufflinks 3.962       Low
cufflinks 7.642        

0 Strain