Gene : SPT16 A. thaliana TAIR10
Primary Identifier:  ? AT4G10710 Defline:  (1 of 1) PF00557//PF08512//PF08644//PF14826 - Metallopeptidase family M24 (Peptidase_M24) // Histone chaperone Rttp106-like (Rtt106) // FACT complex subunit (SPT16/CDC68) (SPT16) // FACT complex subunit SPT16 N-terminal lobe domain (FACT-Spt16_Nlob)
Genomic Order:  893 Name:  ? AT4G10710
Secondary Identifier:  ? PAC:19644850
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10710 0.5kb upstream 0.5kb upstream 4866 true Chr4: 6601989-6606854 Arabidopsis thaliana
AT4G10710 0.5kb upstream 0.5kb upstream 500 false Chr4: 6606355-6606854 Arabidopsis thaliana
AT4G10710 0.5kb downstream 0.5kb downstream 4866 true Chr4: 6601489-6606354 Arabidopsis thaliana
AT4G10710 0.5kb downstream 0.5kb downstream 500 false Chr4: 6601489-6601988 Arabidopsis thaliana
AT4G10710 1.0kb upstream 1.0kb upstream 5366 true Chr4: 6601989-6607354 Arabidopsis thaliana
AT4G10710 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6606355-6607354 Arabidopsis thaliana
AT4G10710 1.0kb downstream 1.0kb downstream 5366 true Chr4: 6600989-6606354 Arabidopsis thaliana
AT4G10710 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6600989-6601988 Arabidopsis thaliana
AT4G10710 2.0kb upstream 2.0kb upstream 6366 true Chr4: 6601989-6608354 Arabidopsis thaliana
AT4G10710 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6606355-6608354 Arabidopsis thaliana
AT4G10710 2.0kb downstream 2.0kb downstream 6366 true Chr4: 6599989-6606354 Arabidopsis thaliana
AT4G10710 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6599989-6601988 Arabidopsis thaliana
AT4G10710 5.0kb upstream 5.0kb upstream 9366 true Chr4: 6601989-6611354 Arabidopsis thaliana
AT4G10710 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6606355-6611354 Arabidopsis thaliana
AT4G10710 5.0kb downstream 5.0kb downstream 9366 true Chr4: 6596989-6606354 Arabidopsis thaliana
AT4G10710 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6596989-6601988 Arabidopsis thaliana
AT4G10710 10.0kb upstream 10.0kb upstream 14366 true Chr4: 6601989-6616354 Arabidopsis thaliana
AT4G10710 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6606355-6616354 Arabidopsis thaliana
AT4G10710 10.0kb downstream 10.0kb downstream 14366 true Chr4: 6591989-6606354 Arabidopsis thaliana
AT4G10710 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6591989-6601988 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366002 5261 Brassicaceae View MSA
123836317 5264 Brassicales-Malvales View MSA
124344664 5266 SBM View MSA
124245707 5268 Malvidae View MSA
124063533 5270 Rosid View MSA
123749575 5271 Pentapetalae View MSA
122793577 5272 Eudicot View MSA
122047619 5273 Angiosperm View MSA
121344342 5274 Embryophyte View MSA
123426084 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.36        
cufflinks 19.544        
cufflinks 14.008       Low
cufflinks 22.442       High
cufflinks 15.062        
cufflinks 22.023       High

0 Strain