Gene : AT4G10790 A. thaliana TAIR10
Defline:  (1 of 1) K18726 - FAS-associated factor 2 (FAF2, UBXD8) Genomic Order:  902
Name:  ? AT4G10790 Secondary Identifier:  ? PAC:19644408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10790 0.5kb upstream 0.5kb upstream 2964 true Chr4: 6640599-6643562 Arabidopsis thaliana
AT4G10790 0.5kb upstream 0.5kb upstream 500 false Chr4: 6643063-6643562 Arabidopsis thaliana
AT4G10790 0.5kb downstream 0.5kb downstream 2964 true Chr4: 6640099-6643062 Arabidopsis thaliana
AT4G10790 0.5kb downstream 0.5kb downstream 500 false Chr4: 6640099-6640598 Arabidopsis thaliana
AT4G10790 1.0kb upstream 1.0kb upstream 3464 true Chr4: 6640599-6644062 Arabidopsis thaliana
AT4G10790 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6643063-6644062 Arabidopsis thaliana
AT4G10790 1.0kb downstream 1.0kb downstream 3464 true Chr4: 6639599-6643062 Arabidopsis thaliana
AT4G10790 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6639599-6640598 Arabidopsis thaliana
AT4G10790 2.0kb upstream 2.0kb upstream 4464 true Chr4: 6640599-6645062 Arabidopsis thaliana
AT4G10790 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6643063-6645062 Arabidopsis thaliana
AT4G10790 2.0kb downstream 2.0kb downstream 4464 true Chr4: 6638599-6643062 Arabidopsis thaliana
AT4G10790 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6638599-6640598 Arabidopsis thaliana
AT4G10790 5.0kb upstream 5.0kb upstream 7464 true Chr4: 6640599-6648062 Arabidopsis thaliana
AT4G10790 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6643063-6648062 Arabidopsis thaliana
AT4G10790 5.0kb downstream 5.0kb downstream 7464 true Chr4: 6635599-6643062 Arabidopsis thaliana
AT4G10790 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6635599-6640598 Arabidopsis thaliana
AT4G10790 10.0kb upstream 10.0kb upstream 12464 true Chr4: 6640599-6653062 Arabidopsis thaliana
AT4G10790 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6643063-6653062 Arabidopsis thaliana
AT4G10790 10.0kb downstream 10.0kb downstream 12464 true Chr4: 6630599-6643062 Arabidopsis thaliana
AT4G10790 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6630599-6640598 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363430 5261 Brassicaceae View MSA
123839297 5264 Brassicales-Malvales View MSA
124344600 5266 SBM View MSA
124243177 5268 Malvidae View MSA
124063311 5270 Rosid View MSA
123749858 5271 Pentapetalae View MSA
122791969 5272 Eudicot View MSA
122043233 5273 Angiosperm View MSA
121344275 5274 Embryophyte View MSA
123424827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.567     High  
cufflinks 19.65       Low
cufflinks 27.002     High  
cufflinks 22.379        
cufflinks 31.567     High High
cufflinks 20.618        

0 Strain