Gene : UBP10 A. thaliana TAIR10
Primary Identifier:  ? AT4G10590 Defline:  (1 of 2) PTHR24006//PTHR24006:SF526 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED
Genomic Order:  877 Name:  ? AT4G10590
Secondary Identifier:  ? PAC:19647751
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10590 0.5kb upstream 0.5kb upstream 5408 true Chr4: 6538541-6543948 Arabidopsis thaliana
AT4G10590 0.5kb upstream 0.5kb upstream 500 false Chr4: 6543449-6543948 Arabidopsis thaliana
AT4G10590 0.5kb downstream 0.5kb downstream 5408 true Chr4: 6538041-6543448 Arabidopsis thaliana
AT4G10590 0.5kb downstream 0.5kb downstream 500 false Chr4: 6538041-6538540 Arabidopsis thaliana
AT4G10590 1.0kb upstream 1.0kb upstream 5908 true Chr4: 6538541-6544448 Arabidopsis thaliana
AT4G10590 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6543449-6544448 Arabidopsis thaliana
AT4G10590 1.0kb downstream 1.0kb downstream 5908 true Chr4: 6537541-6543448 Arabidopsis thaliana
AT4G10590 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6537541-6538540 Arabidopsis thaliana
AT4G10590 2.0kb upstream 2.0kb upstream 6908 true Chr4: 6538541-6545448 Arabidopsis thaliana
AT4G10590 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6543449-6545448 Arabidopsis thaliana
AT4G10590 2.0kb downstream 2.0kb downstream 6908 true Chr4: 6536541-6543448 Arabidopsis thaliana
AT4G10590 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6536541-6538540 Arabidopsis thaliana
AT4G10590 5.0kb upstream 5.0kb upstream 9908 true Chr4: 6538541-6548448 Arabidopsis thaliana
AT4G10590 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6543449-6548448 Arabidopsis thaliana
AT4G10590 5.0kb downstream 5.0kb downstream 9908 true Chr4: 6533541-6543448 Arabidopsis thaliana
AT4G10590 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6533541-6538540 Arabidopsis thaliana
AT4G10590 10.0kb upstream 10.0kb upstream 14908 true Chr4: 6538541-6553448 Arabidopsis thaliana
AT4G10590 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6543449-6553448 Arabidopsis thaliana
AT4G10590 10.0kb downstream 10.0kb downstream 14908 true Chr4: 6528541-6543448 Arabidopsis thaliana
AT4G10590 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6528541-6538540 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366326 5261 Brassicaceae View MSA
123837684 5264 Brassicales-Malvales View MSA
124345697 5266 SBM View MSA
124249814 5268 Malvidae View MSA
124063277 5270 Rosid View MSA
123740103 5271 Pentapetalae View MSA
122793775 5272 Eudicot View MSA
122043130 5273 Angiosperm View MSA
121310077 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.55        
cufflinks 4.314        
cufflinks 3.202       Low
cufflinks 4.717       High
cufflinks 3.668        
cufflinks 4.222        

0 Strain