Gene : AT4G10480 A. thaliana TAIR10
Defline:  (1 of 4) K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Genomic Order:  867
Name:  ? AT4G10480 Secondary Identifier:  ? PAC:19645278
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10480 0.5kb upstream 0.5kb upstream 1790 true Chr4: 6477876-6479665 Arabidopsis thaliana
AT4G10480 0.5kb upstream 0.5kb upstream 500 false Chr4: 6479166-6479665 Arabidopsis thaliana
AT4G10480 0.5kb downstream 0.5kb downstream 1790 true Chr4: 6477376-6479165 Arabidopsis thaliana
AT4G10480 0.5kb downstream 0.5kb downstream 500 false Chr4: 6477376-6477875 Arabidopsis thaliana
AT4G10480 1.0kb upstream 1.0kb upstream 2290 true Chr4: 6477876-6480165 Arabidopsis thaliana
AT4G10480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6479166-6480165 Arabidopsis thaliana
AT4G10480 1.0kb downstream 1.0kb downstream 2290 true Chr4: 6476876-6479165 Arabidopsis thaliana
AT4G10480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6476876-6477875 Arabidopsis thaliana
AT4G10480 2.0kb upstream 2.0kb upstream 3290 true Chr4: 6477876-6481165 Arabidopsis thaliana
AT4G10480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6479166-6481165 Arabidopsis thaliana
AT4G10480 2.0kb downstream 2.0kb downstream 3290 true Chr4: 6475876-6479165 Arabidopsis thaliana
AT4G10480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6475876-6477875 Arabidopsis thaliana
AT4G10480 5.0kb upstream 5.0kb upstream 6290 true Chr4: 6477876-6484165 Arabidopsis thaliana
AT4G10480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6479166-6484165 Arabidopsis thaliana
AT4G10480 5.0kb downstream 5.0kb downstream 6290 true Chr4: 6472876-6479165 Arabidopsis thaliana
AT4G10480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6472876-6477875 Arabidopsis thaliana
AT4G10480 10.0kb upstream 10.0kb upstream 11290 true Chr4: 6477876-6489165 Arabidopsis thaliana
AT4G10480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6479166-6489165 Arabidopsis thaliana
AT4G10480 10.0kb downstream 10.0kb downstream 11290 true Chr4: 6467876-6479165 Arabidopsis thaliana
AT4G10480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6467876-6477875 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376687 5261 Brassicaceae View MSA
123840679 5264 Brassicales-Malvales View MSA
124339670 5266 SBM View MSA
124252258 5268 Malvidae View MSA
124062483 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.505     High  
cufflinks 44.67     High  
cufflinks 50.131     High  
cufflinks 49.517     High  
cufflinks 35.503     High Low
cufflinks 56.71     High High

0 Strain