Gene : AT4G10400 A. thaliana TAIR10
Defline:  (1 of 44) PTHR32212//PTHR32212:SF112 - FAMILY NOT NAMED // FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  858
Name:  ? AT4G10400 Secondary Identifier:  ? PAC:19648299
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10400 0.5kb upstream 0.5kb upstream 2428 true Chr4: 6446209-6448636 Arabidopsis thaliana
AT4G10400 0.5kb upstream 0.5kb upstream 500 false Chr4: 6448137-6448636 Arabidopsis thaliana
AT4G10400 0.5kb downstream 0.5kb downstream 2428 true Chr4: 6445709-6448136 Arabidopsis thaliana
AT4G10400 0.5kb downstream 0.5kb downstream 500 false Chr4: 6445709-6446208 Arabidopsis thaliana
AT4G10400 1.0kb upstream 1.0kb upstream 2928 true Chr4: 6446209-6449136 Arabidopsis thaliana
AT4G10400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6448137-6449136 Arabidopsis thaliana
AT4G10400 1.0kb downstream 1.0kb downstream 2928 true Chr4: 6445209-6448136 Arabidopsis thaliana
AT4G10400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6445209-6446208 Arabidopsis thaliana
AT4G10400 2.0kb upstream 2.0kb upstream 3928 true Chr4: 6446209-6450136 Arabidopsis thaliana
AT4G10400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6448137-6450136 Arabidopsis thaliana
AT4G10400 2.0kb downstream 2.0kb downstream 3928 true Chr4: 6444209-6448136 Arabidopsis thaliana
AT4G10400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6444209-6446208 Arabidopsis thaliana
AT4G10400 5.0kb upstream 5.0kb upstream 6928 true Chr4: 6446209-6453136 Arabidopsis thaliana
AT4G10400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6448137-6453136 Arabidopsis thaliana
AT4G10400 5.0kb downstream 5.0kb downstream 6928 true Chr4: 6441209-6448136 Arabidopsis thaliana
AT4G10400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6441209-6446208 Arabidopsis thaliana
AT4G10400 10.0kb upstream 10.0kb upstream 11928 true Chr4: 6446209-6458136 Arabidopsis thaliana
AT4G10400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6448137-6458136 Arabidopsis thaliana
AT4G10400 10.0kb downstream 10.0kb downstream 11928 true Chr4: 6436209-6448136 Arabidopsis thaliana
AT4G10400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6436209-6446208 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378727 5261 Brassicaceae View MSA
123801972 5264 Brassicales-Malvales View MSA
124299208 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.925       Low
cufflinks 3.061        
cufflinks 2.157        
cufflinks 3.1        
cufflinks 1.919       Low
cufflinks 3.164        

0 Strain