Gene : AT4G10430 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21433 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  861
Name:  ? AT4G10430 Secondary Identifier:  ? PAC:19647536
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10430 0.5kb upstream 0.5kb upstream 3887 true Chr4: 6454703-6458589 Arabidopsis thaliana
AT4G10430 0.5kb upstream 0.5kb upstream 500 false Chr4: 6458090-6458589 Arabidopsis thaliana
AT4G10430 0.5kb downstream 0.5kb downstream 3887 true Chr4: 6454203-6458089 Arabidopsis thaliana
AT4G10430 0.5kb downstream 0.5kb downstream 500 false Chr4: 6454203-6454702 Arabidopsis thaliana
AT4G10430 1.0kb upstream 1.0kb upstream 4387 true Chr4: 6454703-6459089 Arabidopsis thaliana
AT4G10430 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6458090-6459089 Arabidopsis thaliana
AT4G10430 1.0kb downstream 1.0kb downstream 4387 true Chr4: 6453703-6458089 Arabidopsis thaliana
AT4G10430 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6453703-6454702 Arabidopsis thaliana
AT4G10430 2.0kb upstream 2.0kb upstream 5387 true Chr4: 6454703-6460089 Arabidopsis thaliana
AT4G10430 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6458090-6460089 Arabidopsis thaliana
AT4G10430 2.0kb downstream 2.0kb downstream 5387 true Chr4: 6452703-6458089 Arabidopsis thaliana
AT4G10430 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6452703-6454702 Arabidopsis thaliana
AT4G10430 5.0kb upstream 5.0kb upstream 8387 true Chr4: 6454703-6463089 Arabidopsis thaliana
AT4G10430 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6458090-6463089 Arabidopsis thaliana
AT4G10430 5.0kb downstream 5.0kb downstream 8387 true Chr4: 6449703-6458089 Arabidopsis thaliana
AT4G10430 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6449703-6454702 Arabidopsis thaliana
AT4G10430 10.0kb upstream 10.0kb upstream 13387 true Chr4: 6454703-6468089 Arabidopsis thaliana
AT4G10430 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6458090-6468089 Arabidopsis thaliana
AT4G10430 10.0kb downstream 10.0kb downstream 13387 true Chr4: 6444703-6458089 Arabidopsis thaliana
AT4G10430 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6444703-6454702 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370208 5261 Brassicaceae View MSA
123837614 5264 Brassicales-Malvales View MSA
124337122 5266 SBM View MSA
124251175 5268 Malvidae View MSA
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.435        
cufflinks 2.718        
cufflinks 2.574        
cufflinks 3.035       High
cufflinks 2.336       Low
cufflinks 2.913        

0 Strain