Gene : AAE15 A. thaliana TAIR10
Primary Identifier:  ? AT4G14070 Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase
Genomic Order:  1252 Name:  ? AT4G14070
Secondary Identifier:  ? PAC:19645817
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6622 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14070 0.5kb upstream 0.5kb upstream 6699 true Chr4: 8111962-8118660 Arabidopsis thaliana
AT4G14070 0.5kb upstream 0.5kb upstream 500 false Chr4: 8118161-8118660 Arabidopsis thaliana
AT4G14070 0.5kb downstream 0.5kb downstream 6699 true Chr4: 8111462-8118160 Arabidopsis thaliana
AT4G14070 0.5kb downstream 0.5kb downstream 500 false Chr4: 8111462-8111961 Arabidopsis thaliana
AT4G14070 1.0kb upstream 1.0kb upstream 7199 true Chr4: 8111962-8119160 Arabidopsis thaliana
AT4G14070 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8118161-8119160 Arabidopsis thaliana
AT4G14070 1.0kb downstream 1.0kb downstream 7199 true Chr4: 8110962-8118160 Arabidopsis thaliana
AT4G14070 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8110962-8111961 Arabidopsis thaliana
AT4G14070 2.0kb upstream 2.0kb upstream 8199 true Chr4: 8111962-8120160 Arabidopsis thaliana
AT4G14070 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8118161-8120160 Arabidopsis thaliana
AT4G14070 2.0kb downstream 2.0kb downstream 8199 true Chr4: 8109962-8118160 Arabidopsis thaliana
AT4G14070 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8109962-8111961 Arabidopsis thaliana
AT4G14070 5.0kb upstream 5.0kb upstream 11199 true Chr4: 8111962-8123160 Arabidopsis thaliana
AT4G14070 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8118161-8123160 Arabidopsis thaliana
AT4G14070 5.0kb downstream 5.0kb downstream 11199 true Chr4: 8106962-8118160 Arabidopsis thaliana
AT4G14070 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8106962-8111961 Arabidopsis thaliana
AT4G14070 10.0kb upstream 10.0kb upstream 16199 true Chr4: 8111962-8128160 Arabidopsis thaliana
AT4G14070 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8118161-8128160 Arabidopsis thaliana
AT4G14070 10.0kb downstream 10.0kb downstream 16199 true Chr4: 8101962-8118160 Arabidopsis thaliana
AT4G14070 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8101962-8111961 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372411 5261 Brassicaceae View MSA
123800358 5264 Brassicales-Malvales View MSA
124297775 5266 SBM View MSA
124149578 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.418        
cufflinks 3.84        
cufflinks 18.924        
cufflinks 4.093        
cufflinks 19.494        
cufflinks 3.0       Low

0 Strain