Gene : XTH15 A. thaliana TAIR10
Primary Identifier:  ? AT4G14130 Defline:  (1 of 2) PTHR31062:SF34 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 15-RELATED
Genomic Order:  1262 Name:  ? AT4G14130
Secondary Identifier:  ? PAC:19646481
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14130 0.5kb upstream 0.5kb upstream 1731 true Chr4: 8137051-8138781 Arabidopsis thaliana
AT4G14130 0.5kb upstream 0.5kb upstream 500 false Chr4: 8138282-8138781 Arabidopsis thaliana
AT4G14130 0.5kb downstream 0.5kb downstream 1731 true Chr4: 8136551-8138281 Arabidopsis thaliana
AT4G14130 0.5kb downstream 0.5kb downstream 500 false Chr4: 8136551-8137050 Arabidopsis thaliana
AT4G14130 1.0kb upstream 1.0kb upstream 2231 true Chr4: 8137051-8139281 Arabidopsis thaliana
AT4G14130 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8138282-8139281 Arabidopsis thaliana
AT4G14130 1.0kb downstream 1.0kb downstream 2231 true Chr4: 8136051-8138281 Arabidopsis thaliana
AT4G14130 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8136051-8137050 Arabidopsis thaliana
AT4G14130 2.0kb upstream 2.0kb upstream 3231 true Chr4: 8137051-8140281 Arabidopsis thaliana
AT4G14130 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8138282-8140281 Arabidopsis thaliana
AT4G14130 2.0kb downstream 2.0kb downstream 3231 true Chr4: 8135051-8138281 Arabidopsis thaliana
AT4G14130 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8135051-8137050 Arabidopsis thaliana
AT4G14130 5.0kb upstream 5.0kb upstream 6231 true Chr4: 8137051-8143281 Arabidopsis thaliana
AT4G14130 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8138282-8143281 Arabidopsis thaliana
AT4G14130 5.0kb downstream 5.0kb downstream 6231 true Chr4: 8132051-8138281 Arabidopsis thaliana
AT4G14130 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8132051-8137050 Arabidopsis thaliana
AT4G14130 10.0kb upstream 10.0kb upstream 11231 true Chr4: 8137051-8148281 Arabidopsis thaliana
AT4G14130 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8138282-8148281 Arabidopsis thaliana
AT4G14130 10.0kb downstream 10.0kb downstream 11231 true Chr4: 8127051-8138281 Arabidopsis thaliana
AT4G14130 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8127051-8137050 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371748 5261 Brassicaceae View MSA
123838482 5264 Brassicales-Malvales View MSA
124350523 5266 SBM View MSA
124248515 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.072        
cufflinks 32.279     High  
cufflinks 3.162        
cufflinks 42.396     High  
cufflinks 1.652       Low
cufflinks 91.919     High High

0 Strain