Gene : HOG1 A. thaliana TAIR10
Primary Identifier:  ? AT4G13940 Defline:  (1 of 2) 3.3.1.1 - Adenosylhomocysteinase / SAHase
Genomic Order:  1234 Name:  ? AT4G13940
Secondary Identifier:  ? PAC:19646539
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5041 Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13940 0.5kb upstream 0.5kb upstream 2821 true Chr4: 8054361-8057181 Arabidopsis thaliana
AT4G13940 0.5kb upstream 0.5kb upstream 500 false Chr4: 8054361-8054860 Arabidopsis thaliana
AT4G13940 0.5kb downstream 0.5kb downstream 2821 true Chr4: 8054861-8057681 Arabidopsis thaliana
AT4G13940 0.5kb downstream 0.5kb downstream 500 false Chr4: 8057182-8057681 Arabidopsis thaliana
AT4G13940 1.0kb upstream 1.0kb upstream 3321 true Chr4: 8053861-8057181 Arabidopsis thaliana
AT4G13940 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8053861-8054860 Arabidopsis thaliana
AT4G13940 1.0kb downstream 1.0kb downstream 3321 true Chr4: 8054861-8058181 Arabidopsis thaliana
AT4G13940 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8057182-8058181 Arabidopsis thaliana
AT4G13940 2.0kb upstream 2.0kb upstream 4321 true Chr4: 8052861-8057181 Arabidopsis thaliana
AT4G13940 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8052861-8054860 Arabidopsis thaliana
AT4G13940 2.0kb downstream 2.0kb downstream 4321 true Chr4: 8054861-8059181 Arabidopsis thaliana
AT4G13940 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8057182-8059181 Arabidopsis thaliana
AT4G13940 5.0kb upstream 5.0kb upstream 7321 true Chr4: 8049861-8057181 Arabidopsis thaliana
AT4G13940 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8049861-8054860 Arabidopsis thaliana
AT4G13940 5.0kb downstream 5.0kb downstream 7321 true Chr4: 8054861-8062181 Arabidopsis thaliana
AT4G13940 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8057182-8062181 Arabidopsis thaliana
AT4G13940 10.0kb upstream 10.0kb upstream 12321 true Chr4: 8044861-8057181 Arabidopsis thaliana
AT4G13940 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8044861-8054860 Arabidopsis thaliana
AT4G13940 10.0kb downstream 10.0kb downstream 12321 true Chr4: 8054861-8067181 Arabidopsis thaliana
AT4G13940 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8057182-8067181 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370381 5261 Brassicaceae View MSA
123841205 5264 Brassicales-Malvales View MSA
124336884 5266 SBM View MSA
124236827 5268 Malvidae View MSA
124064572 5270 Rosid View MSA
123742592 5271 Pentapetalae View MSA
122797257 5272 Eudicot View MSA
122045256 5273 Angiosperm View MSA
121344239 5274 Embryophyte View MSA
123424541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.585     High  
cufflinks 295.563     High  
cufflinks 102.775     High  
cufflinks 299.86     High  
cufflinks 81.871     High Low
cufflinks 319.945     High  

0 Strain